|   |
20 | . | . | . | |
|
|
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|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
|
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|
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|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
| . | . | . | . | . |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
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|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
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|
Query Sequence |   |
M | R | P | E | . |
. |
. |
. |
. |
N | L | A | Q | Y | I | G | Q | Q | H | L | L | A | A | G | K | P | L | P | R | A | I | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
A | G | H | L | H | S | M | I | L | W | G | P | P | G | T | G | K | T | T | L | A | E | V | I | A | R | Y | A | N | A | D | V | E | R | I | S | A | V | T |
Query Conservation |   |
  |
|
|   | . | . | . | . | . |   |
|
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|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
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|   |
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|   |
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|   |   |
|   |   |   |   |
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|   |
Alig confidence |   |
|
|
|
| . | . | . | . | . |
|
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|
| . | . | . | . | . | . | . | . | . |
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|
Template Conservation |   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |
|
|
|
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
Y | K | P | S | G | N | K | R | V | T | F | K | D | V | G | G | A | E | E | A | I | E | E | L | K | E | V | V | E | F | L | K | D | P | S | K | F | N | R | I | G | A | R | M | P | K | G | I | L | L | V | G | P | P | G | T | G | K | T | L | L | A | R | A | V | A | G | E | A | N | V | P | F | F | H | I | S | G | S | D |
Template Known Secondary structure |   |
|
|
|
|
| S |
|
|
|
| G | G | G |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T |  |  |  |  | T | T | T |
|
|
|
| S |  |  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  | G | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
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|  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |
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|
|
Template SS confidence |   |
|
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  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
|
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|
|
|
|
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
Predicted Secondary structure |   |
. | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
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|
Query Sequence |   |
. |
. |
. |
S | G | V | K | E | I | R | E | A | I | E | R | A | R | Q | N | R | N | A | G | R | R | T | I | L | F | V | D | E | V | H | R | F | N | K | S | Q | Q | D | A | F | L | P | H | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
E | D | G | T | I | T | F | I | G | A | T | T | E | N | P | S | F | E | L | N | S | A | L |
Query Conservation |   |
. | . | . |   |   |   |   |
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |
|   |   |
|
|   |
|
|   |   |
| . | . | . | . | . | . | . | . | . |
|   |
|   |   |   |
|
|   |
|
|
|
|
|
|   |   |   |
|   |   |
|
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
| . | . |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | V | E | L | F | V | G | V | G | A | A | R | V | R | D | L | F | A | Q | A | K | A | H | A | P | C | I | V | F | I | D | E | I | D | A | V | G | R | H | D | E | R | E | Q | T | L | N | Q | L | L | V | E | M | D | G | F | D | S | K | E | G | I | I | V | M | A | A | T | . |
. |
N | R | P | D | I | L | D | P | A | L |
Template Known Secondary structure |   |
T | T | T |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |  | T | G | G | G | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| G | G | G | T |  |  |  |  |  |  |  | . | . | S |
| G | G | G | S |
| G | G | G |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  | . | . |
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
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|
|
|
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|
|
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|
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|
|
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|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
  |   |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | |
|
. | . | 300 | . | . | . | . | . | . | . |
  |
  |   |
154 | . | |
|
. | . | |
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | |
. | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
| . | . |
|
| . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
| . |
. |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
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|
|
|
|
|
|
| . |
|
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|
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|
|
|
|
|
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|
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|
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|
|
Query Sequence |   |
L | S | . |
. |
R | A | . |
R | V | Y | L | L | K | S | L | S | T | E | D | I | E | Q | V | L | T | Q | A | M | E | D | K | T | R | G | Y | G | G | Q | D | I | V | L | P | D | E | T | R | R | A | I | A | E | L | V | N | G | . |
D | A | R | R | A | L | N | T | L | E | M | M | A | D | M | A | E | V | D | D | S | G | K |
Query Conservation |   |
  |
| . | . |
|   | . |   |   |
|   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |   |
|
|   |   |
|   |
| . |
|   |
|   |
|
|
|   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
| . | . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| . | . | . | . | . | . | . | . |
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| . |
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|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
L | R | P | G | R | F | D | K | K | I | V | V | D | P | P | D | M | L | G | R | K | K | I | L | E | I | H | T | R | N | . |
. |
. |
. |
. |
. |
. |
. |
K | P | L | A | E | D | V | N | L | E | I | I | A | K | R | T | P | G | F | V | G | A | D | L | E | N | L | V | N | E | A | A | L | L | A | A | R | E | G | R | D | K |
Template Known Secondary structure |   |
G | S | T | T | S | S |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | S |
| B |
| T | T |
|
|  |  |  |  |  |  | T |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
  |   |
317 | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . |
  |
  |   |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | L | K | P | E | L | L | T | E | I | A | G | E |
Query Conservation |   |
  |   |
|
|   |
|   |
|   |   |   |
|   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |
|   |   |   |
|   |   |   |
|
|   |   |
Template Sequence |   |
. |
. |
I | T | M | K | D | F | E | E | A | I | D | R |
Template Known Secondary structure |   |
. | . | B |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . |
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
389 | 390 | . | . | . | . | . | . | . | . | . | 400 |
  |