Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAZ4
Confidence99.97%DateThu Jan 5 11:14:11 GMT 2012
Rank23Aligned Residues217
% Identity23%Templated1sxjd2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.... .....80.......
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Query Sequence  PLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYA. . . . . . . NADVERISAVTSG
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Template Sequence  PWVEKYRPKNLDEVTAQDHAVTV. . . LKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERG
Template Known Secondary structure 
T

SSTTT

S

TT...TT
TT



STTSSTTS
SSS


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   26...30.........40........ .50.........60.........70.........80.........90.........100..
 
   88.90........ .100.........110.........120.........130.........140.........150.....
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Query Sequence  VKEIREAIERA. . . . . . . . . . . . RQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLS
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Template Conservation                                   
   
                          
               
Template Sequence  ISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLAS
Template Known Secondary structure  TTS





TTS


S
TTGGGS
TTTTS
GGGS
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   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  RARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPE
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Template Sequence  QCSKFRFKALDASNAIDRLRFISEQE. . . . . . . NVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKN. ITST
Template Known Secondary structure  S




TT.......T



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   183......190.........200........ .210.........220.........230.........240.........250 ....
 
   236...240..
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Query Sequence  LLTEIAG
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Template Sequence  QVEELAG
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   255....260.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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