Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAZ4
Confidence99.86%DateThu Jan 5 11:14:11 GMT 2012
Rank46Aligned Residues228
% Identity29%Templated1ofha_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920....... ..30.........40........ .50.........60.........70.........
Predicted Secondary structure 



.....



..............












Query SS confidence 








. . . . .




















. . . . . . . . . . . . . .






























Query Sequence  RMRPENLAQ. . . . . YIGQQHLLAAGKPLPRAIEAG. . . . . . . . . . . . . . HLHSMILWGPPGTGKTTLAEVIARYANADVE
Query Conservation 
 

  


.....



  

     
   
   ..............   



 










 


  
    
Alig confidence 








.....







...









..............






























Template Conservation     
      
   



  
 ...  
   
                     


 







 


 

  
     
Template Sequence  EMTPREIVSELDQHIIGQADAK. . . RAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI
Template Known Secondary structure 


TT

S
...TTSS







TTSST

Template Predicted Secondary structure 






...


















Template SS confidence 















































































   3......10.........20.... .....30.........40.........50.........60.........70.........
 
   80........ .90.........100.... .....110......... 120.........130....
Predicted Secondary structure 




.........
.






............


...
Query SS confidence 








. . . . . . . . .















.














. . . . . . . . . . . .














. . .
Query Sequence  RISAVTSGV. . . . . . . . . KEIREAIERARQNRNA. GRRTILFVDEVHRFN. . . . . . . . . . . . KSQQDAFLPHIEDGT. . .
Query Conservation 




    ......... 


 

  
      .    






  
 ............
  

 

  

 
 ...
Alig confidence 








.........















.














............














...
Template Conservation                                         
   

                       

  

      
Template Sequence  KVEATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVST
Template Known Secondary structure  GGGGSS

SGGGSTTTTTT


GGGGS

SS

SS

Template Predicted Secondary structure 


























Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140.........150.........
 
   135....140.. .......150....... ..160.........170..... ....180.........190......
Predicted Secondary structure  .........

..








.



......







Query SS confidence  . . . . . . . . .







. .














.

















. . . . . .




















Query Sequence  . . . . . . . . . ITFIGATT. . ENPSFELNSALLSRA. RVYLLKSLSTEDIEQVLT. . . . . . QAMEDKTRGYGGQDIVLPDET
Query Conservation  .........  

 


..


   
  

 

 .  
 
  

 


  

 ......  
           
 
 


Alig confidence  .........







..














.

















......




















Template Conservation           
  
                   
                 
       
                     
Template Sequence  KHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDA
Template Known Secondary structure  TT
TT


SSS
GGGS
T






SSTT
TT

Template Predicted Secondary structure 



































Template SS confidence 















































































   294.....300.........310.........320.........330.........340.........350.........360.........370...
 
   197..200... ......210....... ..220.........230.........240.........
Predicted Secondary structure  ........



....














Query SS confidence 






. . . . . . . .













. . . .































Query Sequence  RRAIAEL. . . . . . . . VNGDARRALNTLEM. . . . MADMAEVDDSGKRVLKPELLTEIAGERSARFD
Query Conservation 
  

  ........
 

 
 


 

 ....
   
         

 
 
   
      

Alig confidence 






........













....































Template Conservation 
  
                
 
   
                    
    
   
   
   
Template Sequence  VKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENED
Template Known Secondary structure  S


TTSGGG
TT

T
SSSS


Template Predicted Secondary structure 















Template SS confidence 
































































   374.....380.........390.........400.........410.........420.........430........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions