Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAZ4
Confidence99.84%DateThu Jan 5 11:14:11 GMT 2012
Rank58Aligned Residues223
% Identity19%Templated1fnna2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30......... 40...... ...50.........60.........70.... .....80...
Predicted Secondary structure 










...











....



Query SS confidence 




























.






. .



























. . . .








Query Sequence  NTFQPLAARMRPENLAQYIGQQHLLAAGK. PLPRAIE. . AGHLHSMILWGPPGTGKTTLAEVIARYA. . . . NADVERISA
Query Conservation      




 

  






  

    . 
   
 ..     



 










 


  
....    




Alig confidence 














...










.






..



























....








Template Conservation             
  
... 

      
   
             


 

 
 


 
    
  
          
  
Template Sequence  VDDSVFSPSYVPKRL. . . PHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYING
Template Known Secondary structure  S
GGGGSTT


S

...TT
STTSS



TTSSTTS


T
Template Predicted Secondary structure 














...



















Template SS confidence 















































































   4.....10........ .20.........30.........40.........50.........60.........70.........80
 
   84.....90 .........100.........110.........120.........130. .....
Predicted Secondary structure 



.....................







......



Query SS confidence 






. . . . . . . . . . . . . . . . . . . . .








































. . . . . .




Query Sequence  VTSGVKE. . . . . . . . . . . . . . . . . . . . . IREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIE. . . . . . DGTIT
Query Conservation 
     
.....................

 

  
          






  
 
  

 

  

...... 
   
Alig confidence 






.....................








































......




Template Conservation                  
                                 
                             
Template Sequence  FIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIA
Template Known Secondary structure  TT

STT



SS


TT

TGGGS
TT
SS

Template Predicted Secondary structure 





















Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   137..140........ .150....... ..160.........170.........180.........190.........200....
Predicted Secondary structure 



.





..












.........
Query SS confidence 











.








. .














































. . . . . . . . .
Query Sequence  FIGATTENPSFE. LNSALLSRA. . RVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELV. . . . . . . . .
Query Conservation 

 





   .
  

 

 ..  
 
  

 


  

   
           
 
 



  

  
.........
Alig confidence 











.








..























.....

















.........
Template Conservation   
                                     

       .....             
             
Template Sequence  LVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAG. . . . . LAEGSYSEDILQMIADITGAQTPLDTN
Template Known Secondary structure  SSTTS
TT




B.....B
TTSS
SBSSTT
TT
Template Predicted Secondary structure 










.....









Template SS confidence 















































































   161........170.........180.........190.........200........ .210.........220.........230.....
 
   205....210.........220.........230.........240...
Predicted Secondary structure 














Query SS confidence 






































Query Sequence  NGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGE
Query Conservation   

 
 


 

 
   
         

 
 
   
  
Alig confidence 



















..
















Template Conservation   
  
    

  
   
  ..     

 


  
   
Template Sequence  RGDARLAIDILYRSAYAAQQ. . NGRKHIAPEDVRKSSKE
Template Known Secondary structure  S

..TT
SS

Template Predicted Secondary structure 


..






Template SS confidence 






































   236...240.........250..... ....260.........270..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions