Job Description P0AAZ4 Confidence 96.85% Date Thu Jan 5 11:14:11 GMT 2012 Rank 324 Aligned Residues 89 % Identity 25% Template c3thxB_ PDB info PDB header:dna binding protein/dna Chain: B: PDB Molecule:dna mismatch repair protein msh3; PDBTitle: human mutsbeta complexed with an idl of 3 bases (loop3) and adp Resolution 2.70 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.															.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	.	.	.	.	.	R	Y	A	N	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	R	I	S	A	V	T	S	G	V	K	E	I	R	E	A	I	E	R	A	R	Q	N	R	N	A	G	R	R
Query Conservation																											.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.
Template Sequence		E	D	S	E	R	V	M	I	I	T	G	P	N	M	G	G	K	S	S	Y	I	K	Q	V	A	L	I	T	I	M	A	Q	I	G	S	Y	V	P	A	E	E	A	T	I	G	I	V	D	G	I	F	T	R	M	S	T	F	M	E	E	L	T	D	T	A	E	I	I	R	K	A	.	.	.	.	.	.	T	S	Q
Template Known Secondary structure		T	T	S								S																							T			B	S	S	S								S																								.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																																									.	.	.	.	.	.
Template SS confidence
		877	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.							.	.	950
		108	.	110	.	.	.	.	.	.	.	.	.						120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure														.	.	.	.	.												.
Query SS confidence														.	.	.	.	.												.
Query Sequence		T	I	L	F	V	D	E	V	H	R	F	N	.	.	.	.	.	K	S	Q	Q	D	A	F	L	P	H	I	.	E	D	G	T	I	T	F	I	G	A	T
Query Conservation														.	.	.	.	.												.
Alig confidence														.	.	.	.	.												.
Template Conservation
Template Sequence		S	L	V	I	L	D	E	L	G	R	G	T	S	T	H	D	G	I	A	I	A	Y	A	T	L	E	Y	F	I	R	D	V	K	S	L	T	L	F	V	T
Template Known Secondary structure								S	T	T	T	T	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		961	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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