Job Description P0AAZ4 Confidence 99.57% Date Thu Jan 5 11:14:11 GMT 2012 Rank 93 Aligned Residues 215 % Identity 19% Template c3m6aC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:atp-dependent protease la 1; PDBTitle: crystal structure of bacillus subtilis lon c-terminal domain Resolution 3.40 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		A	Q	Y	I	G	Q	Q	H	L	L	A	A	G	K	P	.	.	.	L	P	R	A	I	E	A	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	N	A	D	V	E	R	I	S	A	V	T	S	G	V	K	E	I	R	E	A	I	E	R	A	R	Q	N	R
Query Conservation																	.	.	.
Alig confidence																	.	.	.																																																							.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		E	E	H	H	G	L	E	K	V	K	E	R	I	L	E	Y	L	A	V	Q	K	L	T	K	S	L	K	G	P	I	L	C	L	A	G	P	P	G	V	G	K	T	S	L	A	K	S	I	A	K	S	L	G	R	K	F	V	R	I	S	L	G	G	R	I	I	Q	G	M	K	K	A	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	S																		S	S	S			S							S	S	S	S	S	S													T																		T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.												.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	.	.	.	.	.	.	.	.	.	.	.	N	K	S	Q	Q	D	A	F	L	P	H	I	E	D	G	T	I	T	F	I	G	A	T	T	E	N	P	S	F	E	L	N	S	A	L	L	S	R	A	R	V	Y	L	L	K	S	L	S	T	E	D	I	E
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation		.																																																						.
Template Sequence		.	G	K	L	N	P	V	F	L	L	D	E	I	D	K	M	S	A	M	L	E	V	L	D	P	E	Q	N	S	S	F	S	D	H	Y	I	E	E	T	F	D	L	S	K	V	L	F	I	A	T	A	N	N	L	.	A	T	I	P	G	P	L	R	D	R	M	E	I	I	N	I	A	G	Y	T	E	I	E	K	L
Template Known Secondary structure		.		S	S	S								S	S	S					G	G	G	T		T	T	T	T	T	B				S	S	S					B		S	S								S	S	T	.	T	T	S
Template Predicted Secondary structure		.																																																						.
Template SS confidence
			412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.		.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																				.	.	.																		.	.															.	.	.	.
Query SS confidence																				.	.	.																		.	.															.	.	.	.
Query Sequence		Q	V	L	T	Q	A	M	E	D	K	T	R	G	Y	G	G	Q	D	.	.	.	I	V	L	P	D	E	T	R	R	A	I	A	E	L	V	N	G	.	.	D	A	R	R	A	L	N	T	L	E	M	M	A	D	.	.	.	.	M	A	E	V	D	D	S	G	K	R	V	L	K	P	E	L	L	T	E	I	A	G
Query Conservation																				.	.	.																		.	.															.	.	.	.
Alig confidence																				.	.	.																		.	.															.	.	.	.
Template Conservation
Template Sequence		E	I	V	K	D	H	L	L	P	K	Q	I	K	E	H	G	L	K	K	S	N	L	Q	L	R	D	Q	A	I	L	D	I	I	R	Y	Y	T	R	E	A	G	V	R	S	L	E	R	Q	L	A	A	I	C	R	K	A	A	K	A	I	V	A	E	E	R	K	R	I	T	V	T	E	K	N	L	Q	D	F	I	G
Template Known Secondary structure							T									T				G	G	G																			S	S	S																				T	T			S						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	S	A	R	F	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	I	F	R	Y	G	Q
Template Known Secondary structure		S			S			S	T
Template Predicted Secondary structure
Template SS confidence
		579	580	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions