Job Description P0AAZ4 Confidence 95.30% Date Thu Jan 5 11:14:11 GMT 2012 Rank 470 Aligned Residues 122 % Identity 17% Template c3ly5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx18; PDBTitle: ddx18 dead-domain Resolution 2.80 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.											.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Query Sequence		A	G	K	P	L	P	R	A	I	E	A	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	.	.	.	.	.	.	.	.	.	.	N	A	D	V	E	R	I	S	A	V	T	S	G	V	K	E	I	R	E	A	I	E	R	A	.	.	.	.	.	.	.	.
Query Conservation																																								.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Alig confidence															.	.	.																							.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation															.	.	.
Template Sequence		Q	H	K	S	I	R	P	L	L	E	G	R	D	.	.	.	L	L	A	A	A	K	T	G	S	G	K	T	L	A	F	L	I	P	A	V	E	L	I	V	K	L	R	F	M	P	R	N	G	T	G	V	L	I	L	S	P	T	R	E	L	A	M	Q	T	F	G	V	L	K	E	L	M	T	H	H	V	H	T	Y
Template Known Secondary structure												T			.	.	.							T	T	S																	T	T			G	G	G									S	S															T	T	T			S
Template Predicted Secondary structure															.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
																																						99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	.	.	.	.	N	K	S	Q	Q	D	A	F	L	P	H	I	E	D	G	T	I	T	F	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		G	L	I	M	G	G	S	N	R	S	A	E	A	Q	K	L	G	N	G	I	N	I	I	V	A	T	P	G	R	L	L	D	H	M	Q	N	T	P	G	F	M	Y	K	N	L	Q	C	L	V	I	D	E	A	D	R	I	L	D	V	G	F	E	E	E	L	K	Q	I	I	K	L	L	P	T	R	R	Q	T	M	L
Template Known Secondary structure						S	S	S														S																	T	T				T	T								S							T	T												S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		139	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		G	A	T	T	E	N	P	S	.	F	E	L	N	S	A	L	L	S	R	A	R	V	Y	L
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		F	S	A	T	Q	T	R	K	V	E	D	L	A	R	I	S	L	K	K	E	P	L	Y	V
Template Known Secondary structure				S	S														S	S
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions