Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAZ4
Confidence96.59%DateThu Jan 5 11:14:11 GMT 2012
Rank364Aligned Residues92
% Identity17%Templatec3llmB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:atp-dependent rna helicase a; PDBTitle: crystal structure analysis of a rna helicase
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70... ......80.........90........
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Query Sequence  HSMILWGPPGTGKTTLAEVIARY. . . . . . . . ANADVERISAVTSGVKEIREAIERA. . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  SVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHA
Template Known Secondary structure  S

TTSSTT
GGG
SSTTT

TTSSTT


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   405....410.........420.........430.........440.........450.........460.........470.........480....
 
   99100.........110.........120.........130. ........140...
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Query Sequence  . . . . . . . . . . . . RQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIE. . . . . DGTITFIGATTE
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Template Sequence  SIXFCTVGVLLRKLEAGIRGISHVIVDEIH. ERDINTDFLLVVLRDVVQAYPEVRIVLXSAT
Template Known Secondary structure 

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TT.S


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   485....490.........500.........510.... .....520.........530.........540.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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