Job Description P0AAZ4 Confidence 99.82% Date Thu Jan 5 11:14:11 GMT 2012 Rank 62 Aligned Residues 204 % Identity 26% Template c3hteC_ PDB info PDB header:motor protein Chain: C: PDB Molecule:atp-dependent clp protease atp-binding subunit clpx; PDBTitle: crystal structure of nucleotide-free hexameric clpx Resolution 4.03 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.																																									.	.
Query SS confidence																								.	.	.	.	.	.																																									.	.
Query Sequence		A	Q	Y	I	G	Q	Q	H	L	L	A	A	G	K	P	L	P	R	A	I	E	A	.	.	.	.	.	.	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	N	A	D	V	E	R	I	S	A	V	T	S	G	.	.	V	K	E	I	R	E	A	I	E	R
Query Conservation																								.	.	.	.	.	.																																									.	.
Alig confidence												.	.	.										.	.	.	.	.	.																																									.	.
Template Conservation												.	.	.
Template Sequence		D	Y	V	I	G	Q	E	Q	A	K	.	.	.	K	V	L	A	V	A	V	Y	N	H	Y	K	R	L	R	N	G	K	S	N	I	L	L	I	G	P	T	G	S	G	K	T	L	L	A	E	T	L	A	R	L	L	D	V	P	F	T	M	A	D	A	T	T	L	E	D	V	E	N	I	I	Q	K	L	L	Q	K
Template Known Secondary structure		T	T	S		S						.	.	.																											T	T	S	S											T	T	T								G	G	G			T	T	T									T
Template Predicted Secondary structure												.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																												.	.	.	.
Predicted Secondary structure																							.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	.	.	N	K	S	Q	Q	D	A	F	L	P	H	I	E	D	G	T	I	T	F	I	G	A	T	T	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	F	E
Query Conservation																							.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	D	Y	D	V	Q	K	A	Q	R	G	I	V	Y	I	D	Q	I	D	K	I	S	R	G	E	G	V	Q	Q	A	L	L	K	L	I	E	G	V	D	T	S	K	I	L	F	I	C	G	G	A	F	A	G	L	D	K	V	I	S	H	R	V	S	E	G	E	L	L	A	Q	V	E	P	E	D	L	I	K	F	G
Template Known Secondary structure		T	T	T							T								G	G	G	G																			T	T	S	S									T	T																	T										T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																													.	.	.	.	.	.																				.	.	.
Query SS confidence											.																													.	.	.	.	.	.																				.	.	.
Query Sequence		L	N	S	A	L	L	S	R	A	.	R	V	Y	L	L	K	S	L	S	T	E	D	I	E	Q	V	L	T	Q	A	M	E	D	K	T	R	G	Y	.	.	.	.	.	.	G	G	Q	D	I	V	L	P	D	E	T	R	R	A	I	A	E	L	V	.	.	.	N	G	D	A	R	R	A	L	N	T	L	E	M	M
Query Conservation											.																													.	.	.	.	.	.																				.	.	.
Alig confidence											.																													.	.	.	.	.	.																				.	.	.
Template Conservation
Template Sequence		L	I	P	E	F	I	G	R	L	P	V	V	A	T	L	N	E	L	S	E	E	A	L	I	Q	I	L	K	E	P	K	N	A	L	T	K	Q	Y	Q	A	L	F	N	L	E	G	V	D	L	E	F	R	D	E	A	L	D	A	I	A	K	K	A	M	A	R	K	T	G	A	R	G	L	R	S	I	V	E	A	A
Template Known Secondary structure								T	T									S												S	S	T	T													T	T																				T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	M	A	E	V	D	D	S	G	K	R	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	D	T	M	Y	D	L	P	S	M	E	D	V
Template Known Secondary structure								S	S	T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions