Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAZ4
Confidence96.80%DateThu Jan 5 11:14:11 GMT 2012
Rank330Aligned Residues91
% Identity19%Templatec2xgjA_
PDB info PDB header:hydrolase/rnaChain: A: PDB Molecule:atp-dependent rna helicase dob1; PDBTitle: structure of mtr4, a dexh helicase involved in nuclear rna2 processing and surveillance
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70 .........80.........90........
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Query Sequence  SMILWGPPGTGKTTLAEVI. . . ARYANADVERISAVTSGVKEIREAIERA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  SVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDITINPDAGCLVMTTEILRSM
Template Known Secondary structure 

TTS
TT
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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   99100.........110......... 120.........130.........140..
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Query Sequence  . . RQNRNAGRRTILFVDEVHRFN. . . . KSQQDAFLPHIEDGTITFIGATT
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Template Sequence  LYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILLPDKVRYVFLSAT
Template Known Secondary structure  T
TTGGGTGGGGG
TTTS
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   246...250.........260.........270.........280.........290.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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