Job Description P0AAZ4 Confidence 99.15% Date Thu Jan 5 11:14:11 GMT 2012 Rank 101 Aligned Residues 141 % Identity 19% Template c2w58B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:primosome component (helicase loader); PDBTitle: crystal structure of the dnai Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure															.																				.	.	.	.																												.	.	.
Query SS confidence															.																				.	.	.	.																												.	.	.
Query Sequence		L	A	A	R	M	R	P	E	N	L	A	Q	Y	.	I	G	Q	Q	H	L	L	A	A	G	K	P	L	P	R	A	I	E	A	.	.	.	.	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	.	.	.	N	A	D	V	E	R	I	S	A	V	T	S	G
Query Conservation															.																				.	.	.	.																												.	.	.
Alig confidence															.																				.	.	.	.																												.	.	.
Template Conservation
Template Sequence		M	P	R	E	I	L	R	A	S	L	S	D	V	D	L	N	D	D	G	R	I	K	A	I	R	F	A	E	R	F	V	A	E	Y	E	P	G	K	K	M	K	G	L	Y	L	H	G	S	F	G	V	G	K	T	Y	L	L	A	A	I	A	N	E	L	A	K	R	N	V	S	S	L	I	V	Y	V	P	E	L	F
Template Known Secondary structure		S		G	G	G					S	S	S					S	T	T														T			T	T											S	S	S	S	S															S	S
Template Predicted Secondary structure
Template SS confidence
		1122	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.
		88	.									90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.																											.	.																			.	.																	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.																											.	.																			.	.																	.	.	.	.	.	.
Query Sequence		V	K	.	.	.	.	.	.	.	.	E	I	R	E	A	I	E	R	A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	.	.	H	R	F	N	K	S	Q	Q	D	A	F	L	P	H	I	E	D	G	.	.	T	I	T	F	I	G	A	T	T	E	N	P	S	F	E	L	.	.	.	.	.	.
Query Conservation				.	.	.	.	.	.	.	.																											.	.																			.	.																	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.												.	.	.	.	.	.										.	.																			.	.																	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.
Template Sequence		R	E	L	K	H	S	L	Q	D	Q	T	M	N	E	K	L	D	Y	I	K	K	.	.	.	.	.	.	V	P	V	L	M	L	D	D	L	G	A	E	A	S	S	W	V	R	D	D	V	F	G	P	I	L	Q	Y	R	M	F	E	N	L	P	T	F	F	T	S	N	F	D	M	Q	Q	L	A	H	H	L	T	Y
Template Known Secondary structure					T	T	T		S	S	S	T											.	.	.	.	.	.		S	S								S	S									T											T	T								S	S										T
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		1202	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.							.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.
								150	.	.	.	.	.	.					.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.	.	.								.	.	.	.
Query SS confidence		.	.	.	.	.	.								.	.	.	.
Query Sequence		.	.	.	.	.	.	N	S	A	L	L	S	R	.	.	.	.	A	R	V	Y	L	L
Query Conservation		.	.	.	.	.	.								.	.	.	.
Alig confidence		.	.	.	.	.	.								.	.	.	.
Template Conservation
Template Sequence		E	E	E	K	V	K	A	A	R	I	M	E	R	I	R	Y	L	A	Y	P	I	E	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1281	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions