Job Description P0AAZ4 Confidence 99.83% Date Thu Jan 5 11:14:11 GMT 2012 Rank 60 Aligned Residues 219 % Identity 22% Template c2r65A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cell division protease ftsh homolog; PDBTitle: crystal structure of helicobacter pylori atp dependent protease, ftsh2 adp complex Resolution 3.30 Å

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		18	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.										.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure								.																								.	.	.	.	.	.	.	.	.																																								.	.
Query SS confidence								.																								.	.	.	.	.	.	.	.	.																																								.	.
Query Sequence		A	R	M	R	P	E	.	N	L	A	Q	Y	I	G	Q	Q	H	L	L	A	A	G	K	P	L	P	R	A	I	E	.	.	.	.	.	.	.	.	.	A	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	N	A	D	V	E	R	I	S	A	V	T	.	.
Query Conservation								.																								.	.	.	.	.	.	.	.	.																																								.	.
Alig confidence								.																								.	.	.	.	.	.	.	.	.																																								.	.
Template Conservation
Template Sequence		N	A	E	K	P	N	V	R	F	K	D	M	A	G	N	E	E	A	K	E	E	V	V	E	I	V	D	F	L	K	Y	P	E	R	Y	A	N	L	G	A	K	I	P	K	G	V	L	L	V	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	G	E	A	H	V	P	F	F	S	M	G	G	S	S	F	I
Template Known Secondary structure										G	G	G	S		S							T	T									S						T	T	T					S							S	S	S	S	S													T								T	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
							86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.									.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.	.	.	.																																		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	S	G	V	K	E	I	R	E	A	I	E	R	A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	.	.	.	.	.	.	.	.	N	K	S	Q	Q	D	A	F	L	P	H	I	E	D	G	T	I	T	F	I	G	A	T	T	E	N	P	S	F	E	L	N	S	A
Query Conservation		.	.	.	.	.																																		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		E	M	F	V	G	L	G	A	S	R	V	R	D	L	F	E	T	A	K	K	Q	.	.	.	.	A	P	S	I	I	F	I	D	E	I	D	A	I	G	K	N	D	E	R	E	Q	T	L	N	Q	L	L	A	E	M	D	G	F	G	S	E	N	A	P	V	I	V	L	A	A	T	N	R	P	E	I	L	D	P	A
Template Known Secondary structure		S			S	S	S		S	T	T											T	.	.	.	.		S						T	T	G	G	G	T						S	T	T	T	S	S	S					T	T			S		S	S	S									S		T	T	S	S		G	G
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		153	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.																																																		.
Query SS confidence							.	.	.																																																		.
Query Sequence		L	L	S	R	A	.	.	.	R	V	Y	L	L	K	S	L	S	T	E	D	I	E	Q	V	L	T	Q	A	M	E	D	K	T	R	G	Y	G	G	Q	D	I	V	L	P	D	E	T	R	R	A	I	A	E	L	V	N	G	.	D	A	R	R	A	L	N	T	L	E	M	M	A	D	M	A	E	V	D	D	S	G
Query Conservation							.	.	.																																																		.
Alig confidence							.	.	.																								.	.	.	.	.	.	.	.																			.
Template Conservation																																	.	.	.	.	.	.	.	.
Template Sequence		L	M	R	P	G	R	F	D	R	Q	V	L	V	D	K	P	D	F	N	G	R	V	E	I	L	K	V	H	I	K	G	.	.	.	.	.	.	.	.	V	K	L	A	N	D	V	N	L	Q	E	V	A	K	L	T	A	G	L	A	G	A	D	L	A	N	I	I	N	E	A	A	L	L	A	G	R	N	N	Q	K
Template Known Secondary structure		G	G	S	T	T	S	S								S															T	T	.	.	.	.	.	.	.	.	S				S													S			S																				S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.									.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	V	L	K	P	E	L	L	T	E	I	A	G	E	R	S	A	R	F	D	N
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		E	.	.	V	R	Q	Q	H	L	K	E	A	V	E	R	G	I	A	G	L	E	K
Template Known Secondary structure		S	.	.									S	S	S	S
Template Predicted Secondary structure			.	.
Template SS confidence
		399			400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions