Job Description P0AAZ4 Confidence 99.09% Date Thu Jan 5 11:14:11 GMT 2012 Rank 103 Aligned Residues 251 % Identity 16% Template c2qenA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:walker-type atpase; PDBTitle: the walker-type atpase paby2304 of pyrococcus abyssi Resolution 2.25 Å

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		21	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure						.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	E	N	.	L	A	Q	Y	I	G	Q	Q	H	L	L	A	A	G	K	P	L	P	R	A	I	E	A	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	N	A	D	V	E	R	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation						.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.														.	.	.									.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.									.	.
Template Sequence		R	P	K	T	R	R	E	D	I	F	D	R	E	E	E	S	R	K	.	.	.	L	E	E	S	L	E	N	Y	.	.	P	L	T	L	L	L	G	I	R	R	V	G	K	S	S	L	L	R	A	F	L	N	E	R	P	G	I	L	I	D	C	R	E	L	Y	A	E	R	G	H	I	T	R	E	E	L	I	K	E
Template Known Secondary structure		S				S	G	G	G	S		S								.	.	.									.	.	S								T	T	S	S												S	S												T	T	T		B
Template Predicted Secondary structure																				.	.	.									.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
																										83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	T	S	G	V	K	E	I	R	E	A	I	E	R	A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	.	.	.	.	.	.	.	N	K	S	Q	Q	D	A	F	L	P	H	I	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	S	T	I	S	P	F	Q	K	F	Q	S	K	F	K	I	S	L	N	L	K	F	L	T	L	E	P	R	K	L	S	L	R	E	V	F	R	E	L	N	D	L	G	E	E	L	G	E	F	I	V	A	F	D	E	A	Q	Y	L	R	F	Y	G	S	R	G	G	K	E	L	L	A	L	F	A	Y	A	Y	D
Template Known Secondary structure						S		S									T						G	G	G	T	S		G	G	G																		S								T	G	G	G	G	G	G	B	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.										.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.
Query Sequence		D	G	T	I	T	F	I	G	A	T	T	E	N	P	S	F	.	.	.	.	.	.	.	.	.	E	L	N	S	A	L	L	S	R	A	R	V	Y	L	L	K	S	L	S	T	E	D	I	E	Q	V	L	T	Q	A	M	E	D	K	T	R	G	Y	G	G	Q	D	I	V	L	P	D	E	T	R	R	A	I	A	E
Query Conservation																		.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.
Template Sequence		S	L	P	N	L	K	I	I	L	T	G	S	E	V	G	L	L	H	D	F	L	K	I	T	D	Y	E	S	P	L	Y	G	R	I	A	G	E	V	L	V	K	P	F	D	K	D	T	S	V	E	F	L	K	R	G	F	R	E	V	.	.	.	.	.	.	.	N	L	D	V	P	E	N	E	I	E	E	A	V	E
Template Known Secondary structure				T	T								S	S										T	T		T	T	S	T	T	T	T																										T	T	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.	.	.	.	230	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.															.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	N	G	D	A	R	R	A	L	N	T	L	E	M	M	A	D	M	A	E	V	D	D	S	G	K	R	V	L	K	P	E	L	L	T	E	I	A	G	E	R	S	A	R	F	D	N	K	G	D	R	F	Y	D	L	I	S	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	K	S	V	R	G
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		L	L	D	G	I	P	G	W	L	V	V	F	G	V	E	Y	L	R	N	G	D	F	G	R	.	.	A	M	K	R	T	L	E	V	A	K	G	L	I	M	G	E	L	E	E	L	R	R	R	S	P	R	Y	V	D	I	L	R	A	I	A	L	G	Y	N	R	W	S	L	I	R	D	Y	L	A	V	K	G	T	K
Template Known Secondary structure				T	T																					.	.																																				T	T			S											T	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	P	D	A	A	L	Y	W	Y	A	R	I	I	T	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	E	P	R	L	Y	A	L	L	E	N	L	K	K	M	N
Template Known Secondary structure																	T	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions