Job Description P0AAZ4 Confidence 99.69% Date Thu Jan 5 11:14:11 GMT 2012 Rank 86 Aligned Residues 267 % Identity 21% Template c2qbyA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:cell division control protein 6 homolog 1; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.							.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																														.																																				.	.	.	.	.	.
Query SS confidence																														.																																				.	.	.	.	.	.
Query Sequence		T	F	Q	P	L	A	A	R	M	R	P	E	N	L	A	Q	Y	I	G	Q	Q	H	L	L	A	A	G	K	.	P	L	P	R	A	I	E	A	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	.	.	.	.	.	.	N	A	D	V	E	R	I	S	A	V
Query Conservation																														.																																				.	.	.	.	.	.
Alig confidence													.	.	.															.																																				.	.	.	.	.	.
Template Conservation													.	.	.
Template Sequence		N	R	E	Y	L	L	P	D	Y	I	P	.	.	.	D	E	L	P	H	R	E	D	Q	I	R	K	I	A	S	I	L	A	P	L	Y	R	E	E	K	P	N	N	I	F	I	Y	G	L	T	G	T	G	K	T	A	V	V	K	F	V	L	S	K	L	H	K	K	F	L	G	K	F	K	H	V	Y	I	N	T	R
Template Known Secondary structure			G	G	G	G	S	S	S				.	.	.	S			T	T											S	S	G	G	G	G	G	T												T	T	S	S																T		S	S
Template Predicted Secondary structure													.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		85	.	.	.	.	90																						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Query Sequence		T	S	G	V	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	E	A	I	E	R	A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	N	K	S	Q	Q	D	A	F	L	P	H	I	.	.	.	.	.	E	D	G	T	I	T	F	I
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Template Conservation
Template Sequence		Q	I	D	T	P	Y	R	V	L	A	D	L	L	E	S	L	D	V	K	V	P	F	T	G	L	S	I	A	E	L	Y	R	R	L	V	K	A	V	R	D	Y	G	S	Q	V	V	I	V	L	D	E	I	D	A	F	V	K	K	Y	N	D	D	I	L	Y	K	L	S	R	I	N	S	E	V	N	K	I	S	F	I
Template Known Secondary structure					S									T	T	T	T	S					S	S	S																T			S								T							S	S		S	T											S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.
Predicted Secondary structure												.										.	.																																																.	.	.
Query SS confidence												.										.	.																																																.	.	.
Query Sequence		G	A	T	T	E	N	P	S	F	E	.	L	N	S	A	L	L	S	R	A	.	.	R	V	Y	L	L	K	S	L	S	T	E	D	I	E	Q	V	L	T	Q	A	M	E	D	K	T	R	G	Y	G	G	Q	D	I	V	L	P	D	E	T	R	R	A	I	A	E	L	V	.	.	.	N	G	D	A	R	R	A	L
Query Conservation												.										.	.																																																.	.	.
Alig confidence												.										.	.																									.	.	.	.	.																			.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		G	I	T	N	D	V	K	F	V	D	L	L	D	P	R	V	K	S	S	L	S	E	E	E	I	I	F	P	P	Y	N	A	E	E	L	E	D	I	L	T	K	R	A	Q	M	A	.	.	.	.	.	F	K	P	G	V	L	P	D	N	V	I	K	L	C	A	A	L	A	A	R	E	H	G	D	A	R	R	A	L
Template Known Secondary structure					S		G	G	G	G	G	G		T	T					T	T	T	T																									.	.	.	.	.	B		S	S		S															T	T
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	L	E	M	M	A	D	M	A	E	V	D	D	S	G	K	R	V	L	K	P	E	L	L	T	E	I	A	G	E	R	S	A	R	F	D	N	K	G	D	R	F	Y	D	L	I	S	A	L	H	K	S	V	R	G	S	A	P	D	A	A	L	Y	W	Y	A	R	I	I	T	A	G	G	D	P	L	Y	V	A
Query Conservation
Alig confidence																			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	L	R	V	S	G	E	I	A	E	R	M	K	D	T	K	.	.	V	K	E	E	Y	V	Y	M	A	K	E	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	D	R	V	R	D	I	I	L	T	L	P	F	H	S	K	L	V	L	M	A	V	V	S	I	S	V	S	T	T	G	A	V	Y
Template Known Secondary structure														T	T		S	S	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.											T	S
Template Predicted Secondary structure																			.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.														.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	C	L	A	I	A	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	Y	L	N	I	C	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions