Job Description P0AAZ4 Confidence 99.78% Date Thu Jan 5 11:14:11 GMT 2012 Rank 71 Aligned Residues 154 % Identity 23% Template c2p65A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pf08_0063; PDBTitle: crystal structure of the first nucleotide binding domain of2 chaperone clpb1, putative, (pv089580) from plasmodium vivax Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.											.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		D	N	T	F	Q	P	L	A	A	R	M	R	P	E	N	L	A	Q	Y	I	G	Q	Q	H	L	L	A	A	G	K	P	L	P	R	A	I	E	A	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	.	.	.	.	.	.	.	.	.	.	N	A	D	V	E
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.
Template Sequence		E	K	Y	S	R	D	L	T	A	L	A	R	A	G	K	L	D	P	V	I	G	R	D	T	E	I	R	R	.	.	.	A	I	Q	I	L	S	R	R	T	K	N	N	P	I	L	L	G	D	P	G	V	G	K	T	A	I	V	E	G	L	A	I	K	I	V	Q	G	D	V	P	D	S	L	K	G	R	K	L	V
Template Known Secondary structure		T	T	T										T	T		S					S								.	.	.						T	S	S	S	S							S		G	G	G															T	T		S		T	T	T	T	T
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		80	.	.							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120										.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Query Sequence		R	I	S	.	.	.	.	.	.	A	V	T	S	G	V	K	E	I	R	E	A	I	E	R	A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	N	K	.	.	.	.	.	.	.	.	.	S	Q	Q	D	A	F	L	P	H	I	E	D	G	T	I	T	F	I	G	A	T	T	E	N
Query Conservation					.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	D	L	S	S	L	I	A	G	A	K	Y	R	G	D	F	E	E	R	L	K	S	I	L	K	E	V	Q	D	A	E	G	Q	V	V	M	F	I	D	E	I	H	T	V	V	G	A	G	A	V	A	E	G	A	L	D	A	G	N	I	L	K	P	M	L	A	R	G	E	L	R	C	I	G	A	T	T	V	S
Template Known Secondary structure														S																		T	T	T	S						T	T	G	G	G	G	S	S	S	S	S	S		T	T	S			T										T	T		S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		145	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		P	S	F	E	.	.	.	L	N	S	A	L	L	S	R	A	R	V	Y	L	L	K	S	L	S
Query Conservation						.	.	.
Alig confidence						.	.	.
Template Conservation
Template Sequence		E	Y	R	Q	F	I	E	K	D	K	A	L	E	R	R	F	Q	Q	I	L	V	E	Q	P	S
Template Known Secondary structure							T	T	T															S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions