Job Description P0AAZ4 Confidence 96.78% Date Thu Jan 5 11:14:11 GMT 2012 Rank 335 Aligned Residues 90 % Identity 24% Template c2o8bA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:dna mismatch repair protein msh2; PDBTitle: human mutsalpha (msh2/msh6) bound to adp and a g t mispair Resolution 2.75 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.															.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	.	.	.	.	.	R	Y	A	N	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	R	I	S	A	V	T	S	G	V	K	E	I	R	E	A	I	E	R	A	R	Q	N	R	N	A	G	R	R
Query Conservation																											.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.
Template Conservation																																																								.	.	.	.	.
Template Sequence		K	D	K	Q	M	F	H	I	I	T	G	P	N	M	G	G	K	S	T	Y	I	R	Q	T	G	V	I	V	L	M	A	Q	I	G	C	F	V	P	C	E	S	A	E	V	S	I	V	D	C	I	L	A	R	V	.	.	.	.	.	G	S	T	F	M	A	E	M	L	E	T	A	S	I	L	R	S	A	T	K	D
Template Known Secondary structure		T	T	S	S								S	T	T	S	S																	T	T			B	S	S	S								S							.	.	.	.	.																T	T			T	T
Template Predicted Secondary structure																																																								.	.	.	.	.
Template SS confidence
		659	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.						.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.						120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure														.	.	.	.	.												.
Query SS confidence														.	.	.	.	.												.
Query Sequence		T	I	L	F	V	D	E	V	H	R	F	N	.	.	.	.	.	K	S	Q	Q	D	A	F	L	P	H	I	.	E	D	G	T	I	T	F	I	G	A	T
Query Conservation														.	.	.	.	.												.
Alig confidence														.	.	.	.	.												.
Template Conservation
Template Sequence		S	L	I	I	I	D	E	L	G	R	G	T	S	T	Y	D	G	F	G	L	A	W	A	I	S	E	Y	I	A	T	K	I	G	A	F	C	M	F	A	T
Template Known Secondary structure		S						S				S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		743	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions