Job Description P0AAZ4 Confidence 98.52% Date Thu Jan 5 11:14:11 GMT 2012 Rank 114 Aligned Residues 117 % Identity 18% Template c2gxaA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:replication protein e1; PDBTitle: crystal structure of papillomavirus e1 hexameric helicase2 with ssdna and mgadp Resolution 3.15 Å

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		38	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		G	K	P	L	P	R	A	I	E	A	.	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	N	A	D	V	E	R	I	S	A	V	T	S	G	V	K	E	I	R	E	A	I	E	R	A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H
Query Conservation												.
Alig confidence												.																																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	N	A	L	K	L	W	L	K	G	I	P	K	K	N	C	L	A	F	I	G	P	P	N	T	G	K	S	M	L	C	N	S	L	I	H	F	L	G	G	S	V	L	S	F	A	N	H	K	S	H	F	.	.	.	.	.	.	.	.	.	.	.	W	L	A	S	L	A	D	T	R	A	A	L	V	D	D	A	T
Template Known Secondary structure										T	T		T	T									S	S	S	S	S												T	T						T	T	S		T	T	S		.	.	.	.	.	.	.	.	.	.	.	T	T	S	G	G	G	T		S						S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.												.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		R	F	N	K	S	Q	Q	D	A	F	L	P	H	I	E	D	G	T	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	G	A	T	T	E	N	P	S	F	E	L	N	S	A	L	.	.	L	S	R	A	R	V	Y	L	L	K	S	L
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		H	A	C	W	R	Y	F	D	T	Y	L	R	N	A	L	D	G	Y	P	V	S	I	D	R	K	H	K	A	A	V	Q	I	K	A	P	P	L	L	V	T	S	N	I	D	V	Q	A	E	D	R	Y	L	Y	L	H	S	R	V	Q	T	F	R	F	E	Q	P
Template Known Secondary structure											T	T						S	S							S	S	S															S	S		T	T	T		S	T	T					T	T								S
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions