Job Description P0AAZ4 Confidence 99.89% Date Thu Jan 5 11:14:11 GMT 2012 Rank 36 Aligned Residues 221 % Identity 23% Template c2dhrC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:ftsh; PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l) Resolution 3.90 Å

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		21	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.
Predicted Secondary structure					.																											.	.	.	.	.	.	.	.	.																																					.	.	.
Query SS confidence					.																											.	.	.	.	.	.	.	.	.																																					.	.	.
Query Sequence		R	P	E	.	N	L	A	Q	Y	I	G	Q	Q	H	L	L	A	A	G	K	P	L	P	R	A	I	E	A	G	H	.	.	.	.	.	.	.	.	.	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	N	A	D	V	E	R	I	S	A	V	T	.	.	.	S	G
Query Conservation					.																											.	.	.	.	.	.	.	.	.																																					.	.	.
Alig confidence					.																											.	.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation
Template Sequence		A	P	K	V	T	F	K	D	V	A	G	A	E	E	A	K	E	E	L	K	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	R	V	P	F	I	T	A	S	G	S	D	F	V	E	M	F
Template Known Secondary structure							T	T	S	S		S																		G	G	G	T	T	T	T	S					S							S	T	T	S	S												T	T								G	G	G	G	T	S	S
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.															120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		V	K	E	I	R	E	A	I	E	R	A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	Q	Q	D	A	F	L	P	H	I	E	.	.	D	G	T	I	T	F	I	G	A	T	T	E	N	P	S	F	E	L	N	S
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		V	G	V	G	A	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	R	G	S	G	V	G	G	G	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	G	F	E	K	D	T	A	I	V	V	M	A	A	T	N	R	P	D	I	L	D	P
Template Known Secondary structure		T	T											T	T	S	T	T	S	S	S								G	G	G	T				S	S	S	S	T	T	T	S	S														G	G	G			S	S										S		G	G	G	S		T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		152	.	.	.			.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure						.	.			.																																																		.
Query SS confidence						.	.			.																																																		.
Query Sequence		A	L	L	S	.	.	R	A	.	R	V	Y	L	L	K	S	L	S	T	E	D	I	E	Q	V	L	T	Q	A	M	E	D	K	T	R	G	Y	G	G	Q	D	I	V	L	P	D	E	T	R	R	A	I	A	E	L	V	N	G	.	D	A	R	R	A	L	N	T	L	E	M	M	A	D	M	A	E	V	D	D	S
Query Conservation						.	.			.																																																		.
Alig confidence						.	.			.																								.	.	.	.	.	.	.	.																			.																			.	.
Template Conservation																																		.	.	.	.	.	.	.	.																																						.	.
Template Sequence		A	L	L	R	P	G	R	F	D	R	Q	I	A	I	D	A	P	D	V	K	G	R	E	Q	I	L	R	I	H	A	R	G	.	.	.	.	.	.	.	.	K	P	L	A	E	D	V	D	L	A	L	L	A	K	R	T	P	G	F	V	G	A	D	L	E	N	L	L	N	E	A	A	L	L	A	A	R	.	.	E
Template Known Secondary structure		T	T	S	S	T	T	S	S																					T	T	S	S	.	.	.	.	.	.	.	.	S					S	S	T	T					T	T	S		S																				.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.																																						.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.									.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.			.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	R	V	L	K	P	E	L	L	T	E	I	A	G	E	R	S	A	R	F	D	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	R	K	I	T	M	K	D	L	E	E	A	A	D	R	V	M	M	L	P	A	K	K
Template Known Secondary structure				S	S			S											T	T		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions