Job Description P0AAZ4 Confidence 98.70% Date Thu Jan 5 11:14:11 GMT 2012 Rank 112 Aligned Residues 167 % Identity 19% Template c2a5yB_ PDB info PDB header:apoptosis Chain: B: PDB Molecule:ced-4; PDBTitle: structure of a ced-4/ced-9 complex Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.						.	.	.
Query SS confidence																																																						.	.	.	.						.	.	.
Query Sequence		P	E	N	L	A	Q	Y	I	G	Q	Q	H	L	L	A	A	G	K	P	L	P	R	A	I	E	A	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	.	.	.	.	A	N	A	D	V	.	.	.	E	R	I	S	A	V	T	S	G	V	K	E	I	R	E	A
Query Conservation																																																						.	.	.	.						.	.	.
Alig confidence																								.																														.	.	.	.						.	.	.
Template Conservation																								.
Template Sequence		P	K	Q	M	T	C	Y	I	R	E	Y	H	V	D	R	V	I	K	K	L	D	E	.	M	C	D	L	D	S	F	F	L	F	L	H	G	R	A	G	S	G	K	S	V	I	A	S	Q	A	L	S	K	S	D	Q	L	I	G	I	N	Y	D	S	I	V	W	L	K	D	S	G	T	A	P	K	S	T	F	D	L
Template Known Secondary structure							S																	.		T	T	S	S	S								S	T	T	S	S													S	S	T	B	T	T	T	B	S											S	T	T
Template Predicted Secondary structure																								.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		95	.	.	.	.	100	.	.	.																													.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	E	R	A	R	Q	N	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	N	K	S	Q	Q	D	A	F	L	P	H	I	E	D	G	T	I	T	F	I	G	A	T	T	E	N	P	S
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.												.	.	.	.	.													.
Template Conservation																																																			.	.												.	.	.	.	.													.
Template Sequence		F	T	D	I	L	L	M	L	K	S	E	D	D	L	L	N	F	P	S	V	E	H	V	T	S	V	V	L	K	R	M	I	C	N	A	L	I	D	R	P	N	T	L	F	V	F	D	D	V	.	.	V	Q	E	E	T	I	R	W	A	Q	E	.	.	.	.	.	L	R	L	R	C	L	V	T	T	R	D	V	.
Template Known Secondary structure										T	T	T	S			T	T					T	T															T	T	S	T	T									.	.												.	.	.	.	.	T	T								S	B	G	.
Template Predicted Secondary structure																																																			.	.												.	.	.	.	.													.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	L	N	S	A	L	L	S	R	A	R	V	Y	L	L	K	S	L	S	T	E	D	I	E	Q	V	L	T	Q	A	M	E	D	K	T	R	G	Y	G	G	Q	D	I	V	L	P	D	E	T	R	R	A	I	A	E	L	V	N	G
Query Conservation
Alig confidence		.																														.	.	.	.	.	.	.	.
Template Conservation		.																														.	.	.	.	.	.	.	.
Template Sequence		.	E	I	S	N	A	A	S	Q	T	C	E	F	I	E	V	T	S	L	E	I	D	E	C	Y	D	F	L	E	A	.	.	.	.	.	.	.	.	Y	G	M	P	M	P	E	K	E	E	D	V	L	N	K	T	I	E	L	S	S	G
Template Known Secondary structure		.	G	G	G	G	G			S																						.	.	.	.	.	.	.	.	T	S																			T	T
Template Predicted Secondary structure		.																														.	.	.	.	.	.	.	.
Template SS confidence
			276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.									.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions