Job Description P0AAZ4 Confidence 99.70% Date Thu Jan 5 11:14:11 GMT 2012 Rank 82 Aligned Residues 300 % Identity 19% Template c1w5sB_ PDB info PDB header:replication Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2; PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form) Resolution 2.4 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.										.
Predicted Secondary structure																															.														.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Query SS confidence																															.														.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Query Sequence		N	T	F	Q	P	L	A	A	R	M	R	P	E	N	L	A	Q	Y	I	G	Q	Q	H	L	L	A	A	G	K	.	P	L	P	R	A	I	E	A	G	H	L	H	S	.	.	.	.	.	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	.	.	.	.	.	.	.	.	.	N
Query Conservation																															.														.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.													.														.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.
Template Sequence		K	D	R	R	V	F	D	E	N	Y	I	P	P	E	.	.	.	L	R	V	R	R	G	E	A	E	A	L	A	R	I	Y	L	N	R	L	L	S	G	A	G	L	S	D	V	N	M	I	Y	G	S	I	G	R	V	G	I	G	K	T	T	L	A	K	F	T	V	K	R	V	S	E	A	A	A	K	E	G	L	T
Template Known Secondary structure		S		G	G	G	G	S	T	T				S	S	.	.	.		S	S	S	S																	T													T	T			S	S	S																			T	T
Template Predicted Secondary structure																.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90																						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Query Sequence		A	D	V	E	R	I	S	A	V	T	S	G	V	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	E	A	I	E	R	A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	.	.	.	.	.	.	N	K	S	Q	Q	D	A	F	L	P
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	Q	A	Y	V	N	A	F	N	A	P	N	L	Y	T	I	L	S	L	I	V	R	Q	T	G	Y	P	I	Q	V	R	G	A	P	A	L	D	I	L	K	A	L	V	D	N	L	Y	V	E	N	H	Y	L	L	V	I	L	D	E	F	Q	S	M	L	S	S	P	R	I	A	A	E	D	L	Y	T	L	L	R
Template Known Secondary structure									G	G	G			S													T						T	T																		T									S	T					S		T	T	S										T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		129	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.															.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.															.	.	.	.	.
Query Sequence		H	I	E	D	G	T	.	.	.	.	.	.	.	I	T	F	I	G	A	T	T	E	N	P	S	F	E	.	.	.	.	.	L	N	S	A	L	L	S	R	A	R	V	Y	L	L	K	S	L	S	T	E	D	I	E	Q	V	L	T	Q	A	M	E	D	K	T	R	G	Y	G	G	Q	D	I	V	L	P	D	E	T
Query Conservation								.	.	.	.	.	.	.															.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.															.	.	.	.	.																																		.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.
Template Sequence		V	H	E	E	I	P	S	R	D	G	V	N	R	I	G	F	L	L	V	A	S	D	V	R	A	L	S	Y	M	R	E	K	I	P	Q	V	E	S	Q	I	G	F	K	L	H	L	P	A	Y	K	S	R	E	L	Y	T	I	L	E	Q	R	A	E	L	G	.	.	.	.	.	L	R	D	T	V	W	E	P	R	H
Template Known Secondary structure						S			T	T	S													T															T	T		S																									.	.	.	.	.	B		G	G	G
Template Predicted Secondary structure																																																																			.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.
		197	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		R	R	A	I	A	E	L	V	.	.	.	.	.	.	N	G	D	A	R	R	A	L	N	T	L	E	M	M	A	D	M	A	E	V	D	D	S	G	K	R	V	L	K	P	E	L	L	T	E	I	A	G	E	R	S	A	R	F	D	N	K	G	D	R	F	Y	D	L	I	S	A	L	H	K	S	V	R	G	S	A
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																										.	.													.	.																						.	.	.	.
Template Conservation																																									.	.													.	.																						.	.	.	.
Template Sequence		L	E	L	I	S	D	V	Y	G	E	D	K	G	G	D	G	S	A	R	R	A	I	V	A	L	K	M	A	C	E	M	A	E	A	M	G	R	D	S	.	.	L	S	E	D	L	V	R	K	A	V	S	E	.	.	N	E	A	A	S	I	Q	T	H	E	L	E	A	L	S	I	H	E	L	I	I	.	.	.	.
Template Known Secondary structure											G	G	G	T	S																			G	G	G	T		S	S	.	.													.	.														S								.	.	.	.
Template Predicted Secondary structure																																									.	.													.	.																						.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		P	D	A	A	L	Y	W	Y	A	R	I	I	T	A	G	G	D	P	L	Y	V	.	.	A	R	R	C	L	A	I	A	S	E	D	V	G	N	A	D	P	R	A	M	Q	V	A	I	A	A	W	D	C	F	T	R	V	G	P	A	E	G	E
Query Conservation																							.	.
Alig confidence		.	.	.	.																		.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	L	R	L	I	A	E	A	T	L	G	G	M	E	W	I	N	A	G	L	L	R	Q	R	Y	E	D	A	S	L	T	M	Y	N	V	K	P	R	G	Y	T	Q	Y	H	I	Y	L	K	H	L	T	S	L	G	L	V	D	A	K
Template Known Secondary structure		.	.	.	.									T	T	T		S	S															T	T	T	S		S																		T	T	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions