Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAZ4
Confidence97.57%DateThu Jan 5 11:14:11 GMT 2012
Rank193Aligned Residues98
% Identity18%Templatec1a1vA_
PDB info PDB header:hydrolase/dnaChain: A: PDB Molecule:protein (ns3 protein); PDBTitle: hepatitis c virus ns3 helicase domain complexed with single2 stranded sdna
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.........70.........80.........90........
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Query Sequence  GHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERA. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  QSFQVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGVDPNIRTGVRTITTGSPITYSTYGKFL
Template Known Secondary structure  SS


TTS
TTTTTT

S
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SS




S
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   195....200.........210.........220.........230.........240.........250.........260.........270....
 
   99100.........110.........120.........130. ........140.....
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Query Sequence  RQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIE. . . . DGTITFIGATTENP
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Template Sequence  ADGGSGGAYDIIICDECHSTDATSILGIGTVLDQAETAGARLVVLATATPP
Template Known Secondary structure  TT





STTT

STTTTT
SSS
T
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   275....280.........290.........300.........310.........320.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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