Job Description P0AEX5 Confidence 98.46% Date Thu Jan 5 11:24:32 GMT 2012 Rank 76 Aligned Residues 147 % Identity 11% Template c3nwjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:atsk2; PDBTitle: crystal structure of shikimate kinase from arabidopsis thaliana2 (atsk2) Resolution 2.35 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	V	T	G	S	S	G	A	G	T	T	T	T	S	L	A	F	R	K	I	F	A	Q	L	N	L	H	A	A	E	V	E	G	D	S	F	H	R	Y	T	R	P	E	M	D	M	A	I	R	K	A	R	D	A	G	R	H	I	S	Y	F	G	P	E	A	N	D	F	G	L	L	E	Q	T	F	I	E	Y	G
Query Conservation
Alig confidence																								.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Sequence		M	Y	L	V	G	M	M	G	S	G	K	T	T	V	G	K	I	M	A	R	S	L	.	.	.	.	.	G	Y	T	F	F	D	C	D	T	L	I	E	Q	A	M	K	G	.	.	.	.	.	.	.	.	.	T	S	V	A	E	I	F	E	H	F	G	E	S	V	F	R	E	K	E	T	E	A	L	K	K	L	S
Template Known Secondary structure							S	T	T	S														.	.	.	.	.	T															T	T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.										140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		Q	S	G	K	G	K	S	R	K	Y	L	H	T	Y	D	E	A	V	P	W	N	Q	V	P	G	T	F	T	P	W	Q	P	L	P	E	P	T	D	V	L	F	Y	E	G	L	H	G	G	V	V	T	P	Q	H	N	V	A	Q	H	V	.	.	D	L	L	V	G	V	V	P	I	V	N	L	E	W	I	Q	K	L
Query Conservation																																																														.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.							.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	Y	H	Q	V	V	V	S	T	G	G	G	A	V	I	R	P	.	.	.	I	N	W	K	Y	M	H	K	G	I	S	I	W	L	D	V	P	L	E	A	L	A	H	R	I	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S							G	G	G	G	S	S		.	.	.							T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
																																			167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	D	T	S	E	R	G	H	S	R	E	A	V	M	D	S	V	V	R	S	M	E	D	Y	I	N	Y	I	T	P	Q	F	S	R	T	H	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	T	A	A	L	N	R	L	S	T	I	W	D	A	R	G	E	A	Y	T	K	A	S	A	R	V	S	L	E	N	I	T	L	K	L	G	Y	R	S
Template Known Secondary structure																					T	T	S	S													T		S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions