Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEX5
Confidence98.43%DateThu Jan 5 11:24:32 GMT 2012
Rank77Aligned Residues137
% Identity8%Templatec3fdiA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of uncharacterized protein from eubacterium2 ventriosum atcc 27560.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  HPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFI
Query Conservation   






 






 
  
   

       


 




  
 
         
    

 
 
 


  

   
 
Alig confidence 



























.....













..................














Template Conservation   


 


  







  

  
   ..... 

 
 
       ..................               
Template Sequence  QIIIAIGREFGSGGHLVAKKLAEHYNIP. . . . . LYSKELLDEVAKDQ. . . . . . . . . . . . . . . . . . DIAIRQFNFIRKKAN
Template Known Secondary structure 


TTSSTT

.....
TT


..................
Template Predicted Secondary structure 









.....

..................


Template SS confidence 















































































   3......10.........20.........30 .........40.... .....50.........
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  EYGQSGKGKSRKYLHTYDEAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLEWIQK
Query Conservation   

 
  
  




 
  
       
 

       
  







         

  







   



 

Alig confidence 
....................................




















.....
















Template Conservation   ....................................                     .....   
 
         

Template Sequence  E. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EKESFVIVGRCAEEILSDNPN. . . . . XISAFILGDKDTKTKRV
Template Known Secondary structure  T....................................S


STTTTT
TT.....
Template Predicted Secondary structure  ....................................












.....

Template SS confidence 















































































   93 ......100.........110.... .....120.........130.
 
   165....170.........180.........190....... ..200.....
Predicted Secondary structure 



...


Query SS confidence 
































. . .







Query Sequence  LIRDTSERGHSREAVMDSVVRSMEDYINYITPQ. . . FSRTHLNF
Query Conservation 
 

  


 
 
 

  
 

 


  

 

...   


  
Alig confidence 
































...







Template Conservation                       
                  

 
Template Sequence  XEREGVDEKTALNXXKKXDKXRKVYHNFYCESKWGDSRTYDICI
Template Known Secondary structure  T


SS
TT
GGG
S
Template Predicted Secondary structure 












Template SS confidence 











































   132.......140.........150.........160.........170.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions