Job Description P0AEX5 Confidence 99.16% Date Thu Jan 5 11:24:32 GMT 2012 Rank 27 Aligned Residues 189 % Identity 15% Template c2h92C_ PDB info PDB header:transferase Chain: C: PDB Molecule:cytidylate kinase; PDBTitle: crystal structure of staphylococcus aureus cytidine2 monophosphate kinase in complex with cytidine-5'-3 monophosphate Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.							.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																										.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.
Query Sequence		V	I	A	V	T	G	S	S	G	A	G	T	T	T	T	S	L	A	F	R	K	I	F	A	Q	L	N	L	H	A	A	E	V	E	G	D	S	F	H	R	.	.	.	.	.	.	Y	T	R	P	E	M	D	M	A	I	R	K	A	R	D	A	G	R	H	I	S	Y	F	G	P	E	A	N	D	F	G	L	L	E
Query Conservation																																										.	.	.	.	.	.
Alig confidence																												.	.	.	.	.										.	.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		N	I	A	L	D	G	P	A	A	A	G	K	S	T	I	A	K	R	V	A	S	E	L	S	M	I	.	.	.	.	.	Y	V	D	T	G	A	M	Y	R	A	L	T	Y	K	Y	L	K	L	N	K	T	E	D	F	A	K	L	V	D	Q	T	T	L	D	L	T	Y	K	A	D	K	G	Q	C	V	I	L	D	N
Template Known Secondary structure									T	T	S	S												T	T			.	.	.	.	.																		T	T	S		S								T									T	T								T	T
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	F	I	E	Y	G	Q	S	G	K	G	K	S	R	K	Y	L	H	T	Y	D	E	A	V	P	W	N	Q	V	P	G	T	F	T	P	W	Q	P	L	P	E	P	T	D	V	L	F	Y	E	G	L	H	G	G	V	V	T	P	Q	H	N	V	A	Q	H	V	D	L	L	V	G	V	V	P	I	V	N	L	E
Query Conservation
Alig confidence																																.	.	.	.	.																						.	.	.	.	.
Template Conservation																																.	.	.	.	.																						.	.	.	.	.
Template Sequence		E	D	V	T	D	F	L	R	N	N	D	V	T	Q	H	V	S	Y	V	A	S	K	E	P	V	R	S	F	A	V	.	.	.	.	.	K	K	Q	K	E	L	A	A	E	K	G	I	V	M	D	G	R	D	I	G	T	.	.	.	.	.	V	V	L	P	D	A	D	L	K	V	Y	M	I	A	S	V	E	E	R
Template Known Secondary structure					G	G	G	S	S	S	S											T	S									.	.	.	.	.								T	T								S	S				.	.	.	.	.				T	T		S
Template Predicted Secondary structure																																.	.	.	.	.																						.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.						110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure									.																				.
Query SS confidence									.																				.
Query Sequence		W	I	Q	K	L	I	R	.	D	T	S	E	R	G	H	S	R	E	A	V	M	D	S	V	V	R	S	.	M	E	D	Y	I	N	Y	I	T	P	Q	F	S	R	T	H	L	N	F	Q	R	V	P	T	V	D	T	S	N
Query Conservation									.																				.
Alig confidence									.																				.																				.	.	.	.	.
Template Conservation																																																	.	.	.	.	.
Template Sequence		A	E	R	R	Y	K	D	N	Q	L	R	G	I	E	S	N	F	E	D	L	K	R	D	I	E	A	R	D	Q	Y	D	M	N	R	E	I	S	P	L	R	K	A	D	D	A	V	T	.	.	.	.	.	L	D	T	T	G
Template Known Secondary structure												T	T																							S	S	S		S				T	T				.	.	.	.	.				T	T
Template Predicted Secondary structure																																																	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.						.	.	.	200	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions