Job Description P0AEX5 Confidence 99.85% Date Thu Jan 5 11:24:32 GMT 2012 Rank 11 Aligned Residues 191 % Identity 22% Template c2gaaA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:hypothetical 39.9 kda protein; PDBTitle: crystal structure of yfh7 from saccharomyces cerevisiae: a2 putative p-loop containing kinase with a circular3 permutation. Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	K	H	P	V	I	A	V	T	G	S	S	G	A	G	T	T	T	T	S	L	A	F	R	K	I	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	N	Y	R	V	C	V	I	L	V	G	S	P	G	S	G	K	S	T	I	A	E	E	L	Q	I	I	N	E	K	Y	H	T	F	L	S	E	H	P	N	V	I	E	V	N	D	R	L	K	P	M	V	N	L	V	D	S	L	K	T	L	Q	P	N	K	V	A	E	M	I	E	N	Q	G	L	F	K	D	H	V
Template Known Secondary structure		T		S										T	T	S																							S	T	T							T	T	S					S	S	T	T	S														T	T	T			G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
																																31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	N	L	H	A	A	E	V	E	G	D	S	F	H	R	Y	T	R	P	E	M	D	M	A	I	R	K	A	R	D	A	G	R	H	I	S	Y	F	G	P	E	A	N	D	F	G	L	L	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence		E	D	V	N	F	Q	P	V	K	Y	S	A	E	E	T	A	V	V	A	R	G	G	T	A	N	A	I	R	I	A	A	S	I	N	I	A	Q	I	V	P	M	D	G	F	H	L	S	R	R	C	L	D	L	F	K	D	P	Q	T	A	H	K	R	R	G	S	.	.	.	.	P	S	T	F	D	S	N	N	F	L
Template Known Secondary structure		T		T	T																T	T	G	G	G	G										S						G	G	G	G	B								T	S	S	S							T	T	T	S	.	.	.	.	G	G	G	B
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.																							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Query Sequence		Q	T	F	I	E	Y	G	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	G	K	S	R	K	Y	L	H	T	Y	D	E	A	V	P	W	N	Q	V	P	G	T	F	T	P	W	Q	P	L	P	E	P	T	D	V	L	F	Y	E	G	L	H	G	G	V	.	V
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																						.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	C	K	I	L	A	K	T	S	L	K	V	S	S	T	S	S	V	F	E	K	L	S	K	T	F	S	Q	T	I	P	D	I	F	V	P	G	F	N	H	A	L	K	D	P	T	P	D	Q	Y	C	.	.	.	.	.	.	.	.	.	I	S	K	F	T	R	I	V	I	L	E	G	L	Y	L	L	Y	D	Q
Template Known Secondary structure																										T				T	T											T	T	T	T									.	.	.	.	.	.	.	.	.			T	T									S	S	T	T	B		S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.										.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																										.	.
Query SS confidence													.	.	.	.	.																										.	.
Query Sequence		T	P	Q	H	N	V	A	Q	H	V	D	.	.	.	.	.	L	L	V	G	V	V	P	I	V	N	L	E	W	I	Q	K	L	I	R	D	T	S	E	R	G	.	.	H	S	R	E	A	V	M	D	S	V	V	R	S	M	E	D	Y	I	N	Y	I	T	P	Q	F	S	R	T	H	L	N	F	Q
Query Conservation													.	.	.	.	.																										.	.
Alig confidence													.	.	.	.	.																								.		.	.
Template Conservation																																									.
Template Sequence		E	N	W	K	K	I	Y	K	T	L	A	D	T	G	A	L	L	V	Y	K	I	D	I	D	Y	E	A	T	E	E	R	V	A	K	R	H	L	Q	S	.	G	L	V	T	T	I	A	E	G	R	E	K	F	R	S	N	D	L	L	N	G	R	D	I	D	N	H	L	I	K	V	D	N	I	V	H
Template Known Secondary structure													T	T	T																										.	T	S		S	S												T	T	T	S	S						T	B				T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions