Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEX5
Confidence97.12%DateThu Jan 5 11:24:32 GMT 2012
Rank194Aligned Residues44
% Identity20%Templatec2chgB_
PDB info PDB header:dna-binding proteinChain: B: PDB Molecule:replication factor c small subunit; PDBTitle: replication factor c domains 1 and 2
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.....
Predicted Secondary structure 


















Query SS confidence 











































Query Sequence  SAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFH
Query Conservation 
   






 






 
  
   

       


 



Alig confidence 











































Template Conservation         

 

 
 


 

  

 
                 
Template Sequence  RKNIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASD
Template Known Secondary structure  TT


S
TTSSGGGTGGGTT
Template Predicted Secondary structure 


























Template SS confidence 











































   35....40.........50.........60.........70........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions