Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEX5
Confidence96.59%DateThu Jan 5 11:24:32 GMT 2012
Rank298Aligned Residues37
% Identity8%Templatec2c99A_
PDB info PDB header:transcription regulationChain: A: PDB Molecule:psp operon transcriptional activator; PDBTitle: structural basis of the nucleotide driven conformational2 changes in the aaa domain of transcription activator pspf
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40....
Predicted Secondary structure 













Query SS confidence 




































Query Sequence  IAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSF
Query Conservation 




 






 
  
   

       


 


Alig confidence 




































Template Conservation 


 







 

  

            
     
Template Sequence  VLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAAL
Template Known Secondary structure 

TTSSTSTTTTS
GGGS
Template Predicted Secondary structure 















Template SS confidence 




































   32.......40.........50.........60........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions