Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEX5
Confidence98.33%DateThu Jan 5 11:24:32 GMT 2012
Rank84Aligned Residues162
% Identity13%Templatec1znyA_
PDB info PDB header:transferaseChain: A: PDB Molecule:guanylate kinase; PDBTitle: crystal structure of mycobacterium tuberculosis guanylate kinase in2 complex with gdp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  VIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEY
Query Conservation 





 






 
  
   

       


 




  
 
         
    

 
 
 


  

   
  
Alig confidence 

























.....













........












.....


...


Template Conservation 

 
 
  






   
       .....        
  
  ........             ..... 
 ...   
Template Sequence  VVVLSGPSAVGKSTVVRCLRERIPNL. . . . . HFSVSATTRAPRPG. . . . . . . . EVDGVDYHFIDPT. . . . . RFQ. . . QLI
Template Known Secondary structure 
STTS

STT
.....


SS


TT........

BTTTB

........
Template Predicted Secondary structure 








.....





........



........
Template SS confidence 















































































   23......30.........40........ .50.........60.. .......70..... ... .80.
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  GQSGKGKSRKYLHTYDEAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLEWIQKLI
Query Conservation 
 
  
  




 
  
       
 

       
  







         

  







   



 


 
Alig confidence 

















.......






















































Template Conservation                    .......                                                   

  
Template Sequence  DQGELLEWAEIHGGLHRS. . . . . . . GTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIG
Template Known Secondary structure  TT
TTTT.......TT




TTS
S
T
Template Predicted Secondary structure 









.......

















Template SS confidence 















































































   82.......90......... 100.........110.........120.........130.........140.........150....
 
   167..170.........180.........190.........200.....
Predicted Secondary structure 






Query SS confidence 






































Query Sequence  RDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNF
Query Conservation 

  


 
 
 

  
 

 


  

 

   


  
Alig confidence 

....



















.....







Template Conservation 
 ....                
   .....    
 

Template Sequence  RG. . . . TETADVIQRRLDTARIELAA. . . . . QGDFDKVV
Template Known Secondary structure  TS....
S
TT.....GGGSS
Template Predicted Secondary structure 

....


.....

Template SS confidence 






































   155. ...160.........170...... ...180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions