Return to main results Retrieve Phyre Job Id

Job DescriptionP32053
Confidence92.62%DateThu Jan 5 11:49:00 GMT 2012
Rank35Aligned Residues107
% Identity12%Templated1k4ta2
SCOP infoDNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Eukaryotic DNA topoisomerase I, catalytic core
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  STRCLFMWQLLTITRPA. . . . . . . . . . . . EAAEARWDEIDF. . . . . . . NASEWKIPAARMKMNRDHTVPLSDGALAILEM
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Template Sequence  QRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQL
Template Known Secondary structure  S








TTTS




GGG
BGGGTT
GGG


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Query Sequence  MKPLSGGREFIFPSRIKPNQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNE
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Template Sequence  FMENKQPEDDLF. . . . . . . DRLNTGILNKHLQDLM. . EGLTAKVFRTYNASITLQ
Template Known Secondary structure  TTT

TTSBSS.......TT

S..TT

TT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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