 |
Job Description | P32053 | Confidence | 75.61% | Date | Thu Jan 5 11:49:00 GMT 2012 |
Rank | 42 | Aligned Residues | 46 |
% Identity | 15% | Template | d1gcca_ |
SCOP info | DNA-binding domain
| DNA-binding domain
| GCC-box binding domain
|
Resolution | UNK |
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | L | I | K | S | S | G | S | K | L | W | Q | F | R | Y | Y | R | P | L | T | K | Q | R | T | K | Q | S | F | G | A | Y | P | A | V | S | L | S | D | A | R | K | L | R | A | E | S | K | V | L | L |
Query Conservation |   |
  |
|
|
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
| . | . |
|   |
|   |
|
|   |   | . |   |   |   |   |   |
|   |   |
|
|
|
|   | . | . |
|   |
|
|
|
|
|
|
|
|   |
|
|   |   |   |
Template Sequence |   |
G | V | R | Q | R | P | W | G | K | . |
. |
F | A | A | E | I | R | D | P | . |
A | K | N | G | A | R | V | W | L | G | T | F | E | . |
. |
T | A | E | D | A | A | L | A | Y | D | R | A | A | F | R | M |
Template Known Secondary structure |   |
T |  |  |  |  | T | T | T |  | . | . |  |  |  |  |  |  |  | T | . | T | T | T | S |  |  |  |  |  |  |  |  | S | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
| . | . |  |  |  |  |  |
|
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
148 | . | 150 | . | . | . | . | . | . | |
|
. | . | . | 160 | . | . | . | . | |
. | . | . | . | . | 170 | . | . | . | . | . | . | . | |
|
. | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|