Job Description P32053 Confidence 5.56% Date Thu Jan 5 11:49:00 GMT 2012 Rank 100 Aligned Residues 44 % Identity 14% Template d1em9a_ SCOP info Retrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain Resolution 2.05

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		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.					.	320	.	.	.	.	.	.	.	.	.	330	.														.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	F	P	S	R	I	K	P	N	Q	P	M	N	S	.	.	.	.	Q	T	V	N	A	A	L	K	R	A	G	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	L	V	S	H	G	L	R	S	I	A	S	T	A	L
Query Conservation																	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	V	I	K	T	E	G	P	A	W	T	P	L	E	P	K	L	I	T	R	L	A	D	T	V	R	T	K	G	L	R	S	P	I	T	M	A	E	V	E	A	L	M	S	S	P	L	L	P	H	D	V	T	N	L	M	R	V	I	L
Template Known Secondary structure							S	S	S																							T	T												T	S	S															S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions