Job Description P32053 Confidence 99.80% Date Thu Jan 5 11:49:00 GMT 2012 Rank 10 Aligned Residues 94 % Identity 44% Template c3ju0A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:phage integrase; PDBTitle: structure of the arm-type binding domain of hai7 integrase Resolution 1.60 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	T	D	T	E	I	K	A	A	K	P	K	D	A	D	Y	Q	L	Y	D	G	D	G	L	T	L	L	I	K	S	S	G	S	K	L	W	Q	F	R	Y	Y	R	P	L	T	K	Q	R	T	K	Q	S	F	G	A	Y	P	A	V	S	L	S	D	A	R	K	L	R	A	E	S	K	V	L	L	A	K	D	I
Query Conservation
Alig confidence																																												.	.
Template Conservation																																												.	.
Template Sequence		S	L	T	D	S	K	V	K	N	A	K	S	L	E	K	E	Y	K	L	T	D	G	F	G	M	H	L	L	V	H	P	N	G	S	K	Y	W	R	L	S	Y	R	.	.	F	E	K	K	Q	R	L	L	A	L	G	V	Y	P	A	V	S	L	A	D	A	R	Q	R	R	D	E	A	K	K	L	L	A	A	G	I
Template Known Secondary structure															S	S								T	T							T	T	S										.	.		T	T											T	T	S																		T	T
Template Predicted Secondary structure																																												.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	Q	E	H	Q	K	E	Q	V	R	N	S	Q	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	S	A	K	K	Q	A	D	N	K	T	I	Q	E	K
Template Known Secondary structure			G	G	G	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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