Job Description P32053 Confidence 99.43% Date Thu Jan 5 11:49:00 GMT 2012 Rank 17 Aligned Residues 116 % Identity 28% Template c2kj9A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: nmr structure of intb phage-integrase-like protein fragment2 90-199 from erwinia carotova subsp. atroseptica: northeast3 structural genomics consortium target ewr217e Resolution UNK

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	N	S	Q	E	A	K	T	N	T	F	L	L	V	A	E	R	W	W	N	V	K	K	T	S	V	T	E	D	Y	A	D	D	I	W	R	S	L	E	R	D	I	F	P	A	I	G	D	I	S	I	T	E	I	K	A	H	T	L	V	K	A	V	Q	P	V	Q	A	R	G	A	L	E	T	V	R	R	L	C
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		S	V	Q	E	K	R	N	N	T	R	A	F	K	T	V	A	K	S	W	F	A	T	K	T	.	T	W	S	E	D	Y	Q	R	S	V	W	T	R	L	E	T	Y	L	F	P	D	I	G	N	K	D	I	A	E	L	D	T	G	D	L	L	V	P	I	K	K	I	E	K	L	G	Y	L	E	I	A	M	R	V	K
Template Known Secondary structure		T	T	T	S	S	S	S	S		S	B											T			.	S	S															T	S	S	T	T	G	G	G	S	B	G	G	G															T	T	T
Template Predicted Secondary structure																										.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	I	N	E	V	M	I	Y	A	Q	N	T	G	L	I	D	A	V	P	S	V	N	I	G	K	A	F	E	K	P	Q	K	K	N	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Y	A	T	A	I	M	R	Y	A	V	Q	Q	K	M	I	R	F	N	P	A	Y	D	L	E	G	A	V	Q	K	L	E	H	H	H	H	H
Template Known Secondary structure														T	T	S	S	S	S								S		S	S	S	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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