Job Description P32053 Confidence 97.32% Date Thu Jan 5 11:49:00 GMT 2012 Rank 31 Aligned Residues 144 % Identity 14% Template c2f4qA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:type i topoisomerase, putative; PDBTitle: crystal structure of deinococcus radiodurans topoisomerase ib Resolution 1.75 Å

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		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		S	T	R	C	L	F	M	W	Q	L	L	T	I	T	R	P	A	.	E	A	A	E	A	R	W	D	E	I	D	F	N	A	S	E	W	K	I	P	A	A	R	M	K	M	N	R	D	H	T	V	P	L	S	D	G	A	L	A	I	L	E	M	M	K	P	L	S	G	G	R	E	F	I	F	P	S	R	I	K	P
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		V	X	A	L	X	T	R	L	L	H	V	A	R	F	R	V	T	Y	G	L	S	T	L	R	Q	R	H	V	V	V	D	G	N	T	V	T	F	R	F	K	G	K	H	G	V	S	Q	H	K	A	T	S	D	R	T	L	A	A	N	X	Q	K	L	L	D	L	P	G	P	W	L	F	Q	T	V	D	A	G	G	G
Template Known Secondary structure																					G	G	G		B	G	G	G					T	T									G	G	G																					T	S		S	S	B	S	S					S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		313		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.																			.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure			.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	.	Q	P	M	N	S	Q	T	V	N	A	A	L	K	R	A	G	L	G	G	V	L	V	S	H	G	L	R	S	I	A	S	T	A	L	N	E	E	G	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	V	I	E	A	A	L	A	H	V	D	K	N	E	V	R	R	A	Y
Query Conservation			.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																					.	.																																																			.
Template Sequence		E	R	R	R	I	H	S	T	E	L	N	A	Y	L	R	E	V	I	G	.	.	P	F	T	A	K	D	F	R	T	W	G	G	T	L	L	A	A	E	Y	L	A	Q	Q	G	T	E	S	S	E	R	Q	A	K	K	V	L	V	D	C	V	K	F	V	A	D	D	L	G	N	T	.	P	A	V	T	R	G	S	Y
Template Known Secondary structure																				T	.	.	T	S																									S	S																				T			.								T
Template Predicted Secondary structure																					.	.																																																			.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.
		374	.	.	.	.	.	380
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	S	D	Y	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	C	P	V	I	F	D
Template Known Secondary structure		S		T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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