Job Description P32053 Confidence 89.07% Date Thu Jan 5 11:49:00 GMT 2012 Rank 39 Aligned Residues 44 % Identity 20% Template c1kjkA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:integrase; PDBTitle: solution structure of the lambda integrase amino-terminal2 domain Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	I	K	S	S	G	S	K	L	W	Q	F	R	Y	Y	R	P	L	T	K	Q	R	T	K	Q	S	F	G	A	Y	P	A	V	S	L	S	D	A	R	K	L	R	A	E	S	K	V	L	L	A	K	D	I
Query Conservation
Alig confidence									.	.	.	.												.	.							.	.	.	.
Template Conservation									.	.	.	.												.	.							.	.	.	.
Template Sequence		L	Y	I	R	N	N	G	.	.	.	.	Y	Y	C	Y	R	D	P	R	T	G	K	.	.	E	F	G	L	G	R	.	.	.	.	D	R	R	I	A	I	T	E	A	I	Q	A	N	I	E	L	F	S	G	H
Template Known Secondary structure						T	T	S	.	.	.	.							T	T	T			.	.						S	.	.	.	.
Template Predicted Secondary structure									.	.	.	.												.	.							.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions