Return to main results Retrieve Phyre Job Id

Job DescriptionP77402
Confidence85.32%DateThu Jan 5 12:28:57 GMT 2012
Rank272Aligned Residues40
% Identity30%Templated2cyya1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Lrp/AsnC-like transcriptional regulator N-terminal domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   179180.........190.........200.........210.........220
Predicted Secondary structure 









Query SS confidence 









































Query Sequence  DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKE
Query Conservation     
      
        

  

     
   
 
 

  
Alig confidence 















..























Template Conservation 
  
  

  
    
.. 
  


  



  

  

  
Template Sequence  DEIDKKIIKILQNDGK. . APLREISKITGLAESTIHERIRKL
Template Known Secondary structure 

TT..


S
Template Predicted Secondary structure 



..




Template SS confidence 









































   6...10.........20. ........30.........40.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions