 |
Job Description | P77402 | Confidence | 69.04% | Date | Thu Jan 5 12:28:57 GMT 2012 |
Rank | 394 | Aligned Residues | 60 |
% Identity | 12% | Template | d2c0za1 |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| dTDP-sugar isomerase
|
Resolution | 1.60 |
|
 |
  |   |
36 | . | . | . | 40 | . | . | |
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |
|
|
| . | . | . |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | H | H | V | H | D | N | . |
. |
. |
E | T | E | L | I | Y | V | K | K | G | V | A | R | F | T | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | S | S | L | Y | V | A | H | A | D | D | I | V | V | I | E | R | G | R | L | H | A | V | A | S | D | V | N | D | P | A | T | T | C | T | C | A |
Query Conservation |   |
  |   |
|   |
|   |   | . | . | . |   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|   |
|   |
|
|   |
|
|
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |
Template Sequence |   |
G | I | H | F | V | D | V | P | P | G | Q | A | K | Y | V | T | C | V | R | G | A | V | F | D | V | V | V | D | L | R | V | G | S | P | T | Y | G | C | W | E | G | T | R | L | D | D | V | S | R | R | A | V | Y | L | S | E | G | I | G | H | G | F | C | A | I | S | D | E | A | T | L | C | Y | L | S | S |
Template Known Secondary structure |   |
 |  |  |  |  |
| T | T | T |
|
|
|  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |
|
| B | T |
| T | T | T | T |
|  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |
| T | T |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|