 |
Job Description | P77402 | Confidence | 97.73% | Date | Thu Jan 5 12:28:57 GMT 2012 |
Rank | 64 | Aligned Residues | 82 |
% Identity | 9% | Template | d1rc6a_ |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| YlbA-like
|
Resolution | 2.60 |
|
 |
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  | . |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | F | V | A | G | K | T | P | R | L | S | R | F | A | F | S | D | D | P | K | W | E | S | G | H | H | V | H | D | N | E | T | E | . |
L | I | Y | V | K | K | G | V | A | R | F | T | I | D | S | S | L | Y | V | A | H | A | D | D | I | V | V | I | E | R | G | R | L | H | A | V | A | S | D | V | N | D | P | A | T | T |
Query Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
| . |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |
Template Sequence |   |
L | S | T | P | K | L | G | A | S | F | V | D | Y | L | V | T | L | H | Q | N | G | G | N | Q | Q | G | F | G | G | E | G | I | E | T | F | L | Y | V | I | S | G | N | I | T | A | K | A | E | G | K | T | F | A | L | S | E | G | G | Y | L | Y | C | P | P | G | S | L | M | T | F | V | N | A | Q | A | E | D | S | Q | I |
Template Known Secondary structure |   |
|
|
| G | G | G | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
| S |
|
| T | T |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  | T | T |  |  |  |  |  |
| T | T |
|
|
|  |  |  |  |
| S | S | S |
|  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . |
  |
  |   |
92 | . | . |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
C | T | C |
Query Conservation |   |
  |   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
|   |
|
Template Sequence |   |
F | L | Y |
Template Known Secondary structure |   |
 |  |  |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
1130 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|