Return to main results Retrieve Phyre Job Id

Job DescriptionP77402
Confidence87.59%DateThu Jan 5 12:28:57 GMT 2012
Rank232Aligned Residues44
% Identity18%Templated1mkma1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator IclR, N-terminal domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190.........200.........210.........220.
Predicted Secondary structure 










Query SS confidence 












































Query Sequence  KKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEY
Query Conservation       
      
        

  

     
   
 
 

   
Alig confidence 
















.


























Template Conservation   

 
 
 

  
    .   
  


  

   

  
 
 

 
Template Sequence  NTLKKAFEILDFIVKNP. GDVSVSEIAEKFNMSVSNAYKYMVVLE
Template Known Secondary structure  TT
S.S
B
TT

Template Predicted Secondary structure 

.






Template SS confidence 












































   2.......10........ .20.........30.........40.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions