Return to main results Retrieve Phyre Job Id

Job DescriptionP77402
Confidence98.40%DateThu Jan 5 12:28:57 GMT 2012
Rank18Aligned Residues90
% Identity13%Templatec3jzvA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein rru_a2000; PDBTitle: crystal structure of rru_a2000 from rhodospirillum rubrum: a cupin-22 domain.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  CFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASD
Query Conservation          
      
                 
 
    

  
  
               
    
     
     
Alig confidence 




































.









































Template Conservation 
   
 
 

       
      
 

     
 
 .  
   

 
 
   
      
  

 
 

 
  
   
 
Template Sequence  PFRSVTRQVLFSGNGLTGELRYFEVGPGGHSTLERHQ. HAHGVXILKGRGHAXVGRAVSAVAPYDLVTIPGWSWHQFRAP
Template Known Secondary structure  S


TT
S


BB
S.S

TT
TT

TT



Template Predicted Secondary structure 



















.














Template SS confidence 















































































   34.....40.........50.........60.........70 .........80.........90.........100.........110..
 
   85....90.....
Predicted Secondary structure 



Query SS confidence 










Query Sequence  VNDPATTCTCA
Query Conservation             
Alig confidence 










Template Conservation 




 


  
Template Sequence  ADEALGFLCXV
Template Known Secondary structure  TTS
Template Predicted Secondary structure 



Template SS confidence 










   113......120...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions