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Job DescriptionP77402
Confidence100.00%DateThu Jan 5 12:28:57 GMT 2012
Rank1Aligned Residues253
% Identity8%Templatec3gbgA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:tcp pilus virulence regulatory protein; PDBTitle: crystal structure of toxt from vibrio cholerae o395
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60 .........70.........80.........90........
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Query Sequence  RLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDS. . SLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYG
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Template Sequence  QTNVYRMSKFDTYIFNNLYI. NDYKMFWIDSGIAKLIDKNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITI
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   8.10.........20....... ..30.........40.........50.........60.........70.........80......
 
   99100.........110.........120.........130.........140.........150.........160.........170........
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Query Sequence  FQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKK
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Template Sequence  SD. . SFIRSLKSYILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKV. . . . . . . EKKYNSIFITDD
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   87. .90.........100.........110.........120.........130.........140..... ....150.......
 
   179180.........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  DVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYE
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Template Sequence  LDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELES. RGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFA
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   168.170.........180.........190.........200........ .210.........220.........230.........240......
 
   259260.........270.........280....
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Query Sequence  NVDHFAKLFLRHVGCSPSDYRRQFKN
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Template Sequence  SVSYFSTVFKSTMNVAPSEYLFMLTG
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   247..250.........260.........270..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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