Job Description P77402 Confidence 64.23% Date Thu Jan 5 12:28:57 GMT 2012 Rank 427 Aligned Residues 73 % Identity 15% Template c2zhhA_ PDB info PDB header:transcription Chain: A: PDB Molecule:redox-sensitive transcriptional activator soxr; PDBTitle: crystal structure of soxr Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.									.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.																																									.
Query SS confidence																						.	.	.	.	.	.	.	.																																									.
Query Sequence		I	T	L	E	Q	L	S	K	K	F	R	A	S	V	S	Y	I	C	H	E	.	.	.	.	.	.	.	.	F	T	K	E	Y	R	I	S	P	I	N	Y	V	I	Q	R	R	M	T	E	A	K	W	S	L	T	N	T	E	L	S	Q	A	E	I	S	W	R	V	G	.	Y	E	N	V	D	H	F	A	K	L	F
Query Conservation																						.	.	.	.	.	.	.	.																																									.
Alig confidence																						.	.	.	.	.	.	.	.																							.																		.
Template Conservation																																																				.
Template Sequence		L	T	P	G	E	V	A	K	R	S	G	V	A	V	S	A	L	H	F	Y	E	S	K	G	L	I	T	S	I	R	N	S	G	N	Q	R	R	Y	K	R	D	V	L	R	Y	V	A	I	I	K	.	I	A	Q	R	I	G	I	P	L	A	T	I	G	E	A	F	G	V	T	L	S	A	K	E	W	K	Q	L	S
Template Known Secondary structure												T	S											T	T	S	S						T	T	T						T	T										.					T	T										T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		268	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		96	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions