Return to main results Retrieve Phyre Job Id

Job DescriptionP77402
Confidence91.20%DateThu Jan 5 12:28:57 GMT 2012
Rank141Aligned Residues43
% Identity19%Templatec2yvhA_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of the operator-binding form of the multi-drug2 binding transcriptional repressor cgmr
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   176...180.........190.........200.........210........
Predicted Secondary structure 











Query SS confidence 










































Query Sequence  IKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFT
Query Conservation        
      
        

  

     
   
 
 

Alig confidence 










































Template Conservation 


  

 

  
    
    
   

  



   

  
 
Template Sequence  SKKEXILRTAIDYIGEYSLETLSYDSLAEATGLSKSGLIYHFP
Template Known Secondary structure 
S
STT

SS
SS
Template Predicted Secondary structure 














Template SS confidence 










































   4.....10.........20.........30.........40......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions