Return to main results Retrieve Phyre Job Id

Job DescriptionP77402
Confidence51.42%DateThu Jan 5 12:28:57 GMT 2012
Rank495Aligned Residues49
% Identity12%Templatec2fjrB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:repressor protein ci; PDBTitle: crystal structure of bacteriophage 186
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190.........200.........210.........220.........230..
Predicted Secondary structure 













Query SS confidence 























































Query Sequence  KKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQR
Query Conservation       
      
        

  

     
   
 
 

   
 
   

   
Alig confidence 















.....





















..










Template Conservation     
 
 

    
  .....

 


  



  


  
  ..       
   
Template Sequence  SNVDVLDRICEAYGFS. . . . . QKIQLANHFDIASSSLSNRYTR. . GAISYDFAAHC
Template Known Secondary structure 
T
S.....
TTTTT

S..SS

Template Predicted Secondary structure 




.....




..



Template SS confidence 























































   910.........20.... .....30.........40...... ...50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions