Job Description P77402 Confidence 80.06% Date Thu Jan 5 12:28:57 GMT 2012 Rank 312 Aligned Residues 152 % Identity 14% Template c2bgcA_ PDB info PDB header:transcription Chain: A: PDB Molecule:prfa; PDBTitle: prfa-g145s, a constitutive active mutant of the2 transcriptional regulator in l.monocytogenes Resolution 2.3 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		E	L	I	Y	V	K	K	G	V	A	R	F	T	I	.	.	.	D	S	S	L	Y	V	A	H	A	D	D	I	V	V	I	E	R	G	R	L	H	A	V	A	S	D	V	N	D	P	A	T	T	C	T	C	A	L	Y	G	F	Q	F	Q	G	A	E	E	N	Q	L	L	Q	P	H	S	C	P	V	I	A	A	G
Query Conservation																.	.	.
Alig confidence																.	.	.									.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		Y	C	I	F	L	Y	D	G	I	T	K	L	T	S	I	S	E	N	G	T	I	M	N	L	Q	.	.	.	.	.	Y	Y	K	G	A	F	V	I	M	S	G	F	I	D	T	E	T	S	V	G	Y	Y	N	L	E	V	I	S	E	Q	A	T	A	Y	V	I	K	I	N	E	L	K	E	L	L	S	K	N	L	T
Template Known Secondary structure									S									T	T	S							.	.	.	.	.				S	S					S	B		T	T	T			B	S									S	S
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	K	E	V	I	K	T	L	F	N	E	L	S	V	I	L	P	Q	S	K	N	S	Q	T	S	S	L	W	D	A	F	A	Y	T	L	A	I	L	Y	Y	E	N	F	K	N	A	Y	R	S	E	Q	G	Y	I	K	K	D	V	L	I	K	D	I	L	F	Y	L	N	N	N	Y	R	E	K	I	T	L	E	Q
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	F	F	Y	V	F	Q	T	L	Q	K	Q	V	S	Y	S	L	A	K	F	N	D	F	S	I	N	G	K	L	G	S	I	C	S	Q	L	L	I	L	T	Y	V	Y	G	K	E	T	P	D	G	I	K	I	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	L	T	M	Q	E
Template Known Secondary structure																										T	T																						T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																			.	.	.	170	.	.	.
		202	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		L	S	K	K	F	R	A	S	V	S	Y	.	I	C	H	E	F	T	K
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		L	G	Y	S	S	G	I	A	H	S	S	A	V	S	R	I	I	S	K
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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