Job Description P77402 Confidence 73.15% Date Thu Jan 5 12:28:57 GMT 2012 Rank 362 Aligned Residues 154 % Identity 7% Template c1zybA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcription regulator, crp family; PDBTitle: crystal structure of transcription regulator from bacteroides2 thetaiotaomicron vpi-5482 at 2.15 a resolution Resolution 2.15 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		R	F	T	I	D	S	S	L	Y	V	A	H	A	D	D	.	.	.	.	I	V	V	I	E	R	G	R	L	H	A	V	A	S	D	V	N	D	P	A	T	T	C	T	C	A	L	Y	G	F	Q	F	Q	G	A	E	E	N	Q	L	L	Q	P	H	S	C	P	V	I	A	A	G	Q	G	K	E	V	I	K	T	L
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																																	.	.
Template Conservation																																																					.	.
Template Sequence		F	I	K	H	K	A	G	E	T	I	I	K	S	G	N	P	C	T	Q	L	C	F	L	L	K	G	E	I	S	I	V	T	N	A	K	E	N	I	Y	T	V	I	E	Q	I	E	A	P	Y	L	I	.	.	E	P	Q	S	L	F	G	X	N	T	N	Y	A	S	S	Y	V	A	H	T	E	V	H	T	V	C	I
Template Known Secondary structure							T	T						T	T	S	B										S									G	G	G	S									S	S				.	.		G	G	G	G	S	S	S			B		S	S					S	S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.
Query Sequence		F	N	E	L	S	V	I	L	P	Q	S	K	N	S	Q	T	S	S	L	W	D	A	F	A	Y	T	L	A	I	L	Y	Y	E	N	F	K	N	A	Y	R	S	E	Q	G	Y	I	K	K	D	V	L	I	K	D	I	L	F	Y	L	N	.	.	.	.	.	.	.	N	N	Y	R	E	K	I	T	L	E	Q	L	S
Query Conservation																																																														.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.
Template Sequence		S	K	A	F	V	L	S	D	L	F	R	Y	D	I	F	R	L	N	Y	X	N	I	V	S	N	R	A	Q	N	L	Y	S	R	L	W	D	E	P	T	L	D	.	.	.	.	.	.	.	.	.	L	K	S	K	I	I	R	F	F	L	S	H	C	E	K	P	Q	G	E	K	T	F	K	V	K	X	D	D	L	A
Template Known Secondary structure									T	G	G	G	S																						T	T	S					S	.	.	.	.	.	.	.	.	.											T	T		S	S	S	S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.										.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	F	R	A	S	V	S	Y	I	C	H	E	F	T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	C	L	D	D	T	R	L	N	I	S	K	T	L	N	E
Template Known Secondary structure					T	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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