Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE82
Confidence98.72%DateThu Jan 5 11:22:45 GMT 2012
Rank37Aligned Residues96
% Identity20%Templatec3h4lB_
PDB info PDB header:dna binding protein, protein bindingChain: B: PDB Molecule:dna mismatch repair protein pms1; PDBTitle: crystal structure of n terminal domain of a dna repair protein
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   350.........360.........370.........380.........390.........400.........410... ......420...
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Query Sequence  LESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRE. . . . . . SGGTGLGLAI
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Template Sequence  LTTAVKELVDNSIDANANQIEIIFKDYGLE. SIECSDNGDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSS
Template Known Secondary structure  TT
SGGGTS.
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TTTGGGSS



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   55....60.........70.........80.... .....90.........100.........110.........120.........130...
 
   424.....430.........440.........450.
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Query Sequence  VETAIQQHRGWVKAEDSPLGGLRLVIWL
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Template Sequence  LCGI. . . . . AKLSVITTTSPPKADKLEY
Template Known Secondary structure  S.....SSSTT
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   134... ..140.........150......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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