Job Description P0AE82 Confidence 100.00% Date Thu Jan 5 11:22:45 GMT 2012 Rank 4 Aligned Residues 227 % Identity 17% Template c2bu8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands Resolution 2.5 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.												.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	N	Q	M	V	T	A	L	E	R	M	M	T	S	Q	Q	R	L	L	S	D	I	S	H	E	L	R	T	P	L	T	R	L	Q	L	G	T	A	L	L	.	.	.	.	.	.	.	.	.	.	.	R	R	R	S	G	E	S	K	E	L	E	R	I	E	T	E	A	Q	R	L	D	S	M	I	N	D	L	L	V
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	M	E	F	L	D	K	D	P	E	D	H	R	T	L	S	Q	F	T	D	A	L	V	T	I	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	L	E	Y	K	D	T	Y	G	D	D	P	V	S	N	Q	N	I	Q	Y	F	L	D	R	F	Y	L	S	R	I	S	I	R	M	L	I	N	Q	H	T	L
Template Known Secondary structure				T	T	S	S			T	T	S	T	T	T	T														T	T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.							.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.									.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query Sequence		M	S	R	N	Q	Q	K	N	A	L	V	S	.	.	.	.	.	.	E	T	I	K	A	N	Q	L	W	S	E	V	L	D	N	A	A	F	E	A	E	Q	.	.	.	.	.	.	.	.	M	G	K	S	L	T	V	N	F	P	P	G	P	W	P	L	Y	G	N	P	N	A	L	E	S	A	L	E	N	I	V	R
Query Conservation														.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	F	D	G	S	T	N	P	A	H	P	K	H	I	G	S	I	D	P	N	C	N	V	S	E	V	V	K	D	A	Y	D	M	A	K	L	L	C	D	K	Y	Y	M	A	S	P	D	L	E	I	Q	E	I	N	A	A	N	S	K	Q	P	I	H	M	V	Y	V	P	S	H	L	Y	H	M	L	F	E	L	F	K
Template Known Secondary structure			T	S	S	S		S	S		S		S		B	T	T	B																										S												S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		360	.	.	.	.	.	.	.	.										.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.
Query Sequence		N	A	L	R	Y	S	H	T	K	.	.	.	.	.	.	.	.	.	I	E	V	G	F	A	V	D	K	D	G	I	T	I	T	V	D	D	D	G	P	G	V	S	P	E	D	R	E	Q	I	F	R	P	F	Y	R	T	D	E	A	R	D	R	E	S	G	G	T	G	L	G	L	A	I	V	E	T	A	I	Q	Q
Query Conservation											.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.
Template Sequence		N	A	M	R	A	T	V	E	S	H	E	S	S	L	I	L	P	P	I	K	V	M	V	A	L	G	E	E	D	L	S	I	K	M	S	D	R	G	G	G	V	P	L	R	K	I	E	R	L	F	S	Y	M	Y	S	T	.	.	.	.	.	.	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	K	Y
Template Known Secondary structure										T	T	T	T		S													S	S																			G	G	G	G		T	T	T	T		.	.	.	.	.	.					S	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.							.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	G	W	V	K	A	E	D	S	P	L	G	G	L	R	L	V	I	W	L	P	L	Y	K	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Q	G	D	L	Q	L	F	S	M	E	G	F	G	T	D	A	V	I	Y	L	K	A	L	S	T	D
Template Known Secondary structure		T	T									T	T											S	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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