Job Description P23484 Confidence 98.66% Date Thu Jan 5 11:39:30 GMT 2012 Rank 23 Aligned Residues 73 % Identity 16% Template d1rp3a3 SCOP info Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Sigma2 domain of RNA polymerase sigma factors Resolution 2.30

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																										.	.	.																													.	.	.
Query SS confidence																										.	.	.																													.	.	.
Query Sequence		T	A	S	L	T	F	E	S	L	Y	G	T	H	H	G	W	L	K	S	W	L	T	R	K	.	.	.	L	Q	S	A	F	D	A	D	D	I	A	Q	D	T	F	L	R	V	M	V	S	E	T	L	S	T	I	R	.	.	.	D	P	R	S	F	L	C	T	I	A	K	R	V	M	V	D	L	F	R	R	N
Query Conservation																										.	.	.																													.	.	.
Alig confidence																										.	.	.																													.	.	.
Template Conservation
Template Sequence		S	N	Q	I	E	R	E	E	L	I	L	K	Y	L	P	L	V	K	A	I	A	T	N	I	K	K	H	L	P	E	D	V	D	I	R	D	L	I	S	Y	G	V	I	G	L	I	K	A	V	D	N	L	S	T	E	N	P	K	R	A	E	A	Y	I	K	L	R	I	K	G	A	I	Y	D	Y	L	R	S	L
Template Known Secondary structure																											T	T	S		T	T	S																			T						T																					T	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions