Return to main results Retrieve Phyre Job Id

Job DescriptionP23484
Confidence92.79%DateThu Jan 5 11:39:30 GMT 2012
Rank79Aligned Residues55
% Identity20%Templated1r1ua_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ArsR-like transcriptional regulators
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120...... ...130.........140.........150.........160..
Predicted Secondary structure 

.






Query SS confidence 


















.



































Query Sequence  LETLQLLDSMLDGLNGKTR. EAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKAVE
Query Conservation               
     . 
  
    
 
  


  



  

   
 

  
Alig confidence 


















.



































Template Conservation             


    

 

  
      
 


  
 

 



 

  
  
Template Sequence  TDTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKS
Template Known Secondary structure  T
S

B
T

Template Predicted Secondary structure 









Template SS confidence 























































   10.........20.........30.........40.........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions